Protein Info for mRNA_2062 in Rhodosporidium toruloides IFO0880

Name: 10430
Annotation: K06210 NMNAT nicotinamide mononucleotide adenylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 352 PF01467: CTP_transf_like" amino acids 28 to 233 (206 residues), 85.6 bits, see alignment E=2e-28 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase" amino acids 28 to 258 (231 residues), 150.2 bits, see alignment E=3.7e-48

Best Hits

Predicted SEED Role

"Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family @ Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family" (EC 2.7.7.1, EC 2.7.7.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.1 or 2.7.7.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (352 amino acids)

>mRNA_2062 K06210 NMNAT nicotinamide mononucleotide adenylyltransferase (Rhodosporidium toruloides IFO0880)
MDGPYTFPTHRLARLEGANADKTPLVLVACGSYSPVTFLHLRLFEMARDDAHFNTSFHVV
GGYLSPVNDKYNKLGLASAKHRVAMCDQAVSDTSDWLMVDPWEARQPRYLPTAQVLDHFD
HELNTVRGGADVVVRDPRTGETRVEKRRVRVMLLAGSDLILTMSEPGVWAEKDLHHILGI
YGCYIIERSESELDQSIFSSSSVHSRSPLALYRHNIHMVEQTVRNDVSSTKVRLFIRKGM
SVKYLIPSVVIRYINRHGYRTADRRRSSLAQVAPTASPSLVPTLRESGALADDSAVVFED
DEGDEAEKEREKERRVERERREGASLSPAHADQAQQEQAGGDVEMIASTSAS