Protein Info for mRNA_2062 in Rhodosporidium toruloides IFO0880
Name: 10430
Annotation: K06210 NMNAT nicotinamide mononucleotide adenylyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family @ Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family" (EC 2.7.7.1, EC 2.7.7.18)
MetaCyc Pathways
- NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde (4/4 steps found)
- NAD salvage pathway I (PNC VI cycle) (6/7 steps found)
- NAD de novo biosynthesis II (from tryptophan) (7/9 steps found)
- NAD salvage pathway II (PNC IV cycle) (4/5 steps found)
- NAD salvage pathway V (PNC V cycle) (4/5 steps found)
- superpathway of NAD biosynthesis in eukaryotes (10/14 steps found)
- NAD de novo biosynthesis I (from aspartate) (4/6 steps found)
- NAD de novo biosynthesis IV (anaerobic) (4/6 steps found)
- NAD biosynthesis III (from nicotinamide) (1/2 steps found)
- NAD salvage pathway IV (from nicotinamide riboside) (1/2 steps found)
- NAD salvage (plants) (6/11 steps found)
- aspartate superpathway (15/25 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.7.1 or 2.7.7.18
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (352 amino acids)
>mRNA_2062 K06210 NMNAT nicotinamide mononucleotide adenylyltransferase (Rhodosporidium toruloides IFO0880) MDGPYTFPTHRLARLEGANADKTPLVLVACGSYSPVTFLHLRLFEMARDDAHFNTSFHVV GGYLSPVNDKYNKLGLASAKHRVAMCDQAVSDTSDWLMVDPWEARQPRYLPTAQVLDHFD HELNTVRGGADVVVRDPRTGETRVEKRRVRVMLLAGSDLILTMSEPGVWAEKDLHHILGI YGCYIIERSESELDQSIFSSSSVHSRSPLALYRHNIHMVEQTVRNDVSSTKVRLFIRKGM SVKYLIPSVVIRYINRHGYRTADRRRSSLAQVAPTASPSLVPTLRESGALADDSAVVFED DEGDEAEKEREKERRVERERREGASLSPAHADQAQQEQAGGDVEMIASTSAS