Protein Info for mRNA_2089 in Rhodosporidium toruloides IFO0880

Name: 10457
Annotation: KOG0637 Sucrose transporter and related proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 725 transmembrane" amino acids 192 to 211 (20 residues), see Phobius details amino acids 240 to 260 (21 residues), see Phobius details amino acids 291 to 310 (20 residues), see Phobius details amino acids 320 to 338 (19 residues), see Phobius details amino acids 380 to 402 (23 residues), see Phobius details amino acids 430 to 455 (26 residues), see Phobius details amino acids 476 to 495 (20 residues), see Phobius details amino acids 501 to 523 (23 residues), see Phobius details amino acids 626 to 649 (24 residues), see Phobius details amino acids 670 to 692 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (725 amino acids)

>mRNA_2089 KOG0637 Sucrose transporter and related proteins (Rhodosporidium toruloides IFO0880)
MPPSPRTPPAPPTPPGQPHTTYQSFADLSPSSPPPHSNGSPGARSKRRRSFRALGRGTGG
EDGRDERDTDGKDSEGKNESDESEWTTWRLNTLTVGILGAQLAWTVEMAYGTPYLLGLGL
SKEATSLVWMAGPLSGLIVQPVVGECQASLGVLCETSTALADYAASSLAALTPCCWTGAL
SDSSPGRFRRRFYILLSTLLVILSTILIAYARELASLLCSSSVFGGVGDWDPQRKERERL
VAIAAGVLGFYVLDFSLNGLQASLRALALDLSPLTLQSLSTAWLGRHTHIGNILGYLFGF
LDLGHSPLLSWLGDGQFRKLSAISLVVLAGTVGVTCWCSEEKERKGEEETGKEGVWSKVV
GVVRDVRDNVRELPMPVRRVCYVQFFAWTGWFPFLFYSTTYVSETLYASLPPSTPPPSSD
SATRLGSLGLLLYALVSLLTGTLLPFLTSLCTTYPSLPSRLPRWARVALSNLSPRACWVA
GLVWFAVVMEGTFFVSGTKGAMAVVALAGVPWAINCWVPFALVMECIREMEDSPPTSPTS
SSASTPPPSSPTQAPPRAPPRLRDRPPFRATTLRHPSYHGLPSSSPHRTPSSPSHTSHQP
TSRTRLLSHPTDEPQPRRKQPAGGTILGLHNLSIVVPQFFVALVSALIFRLTSHSPSSST
EAGGGEGESVVWVLRFGGLASLVGAGVCAWVVRETGSEREYREWVRSGRRRMDGDGEQEV
GEGSV