Protein Info for mRNA_2200 in Rhodosporidium toruloides IFO0880

Name: 10568
Annotation: K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 985 PF17907: AWS" amino acids 319 to 356 (38 residues), 52.1 bits, see alignment (E = 7.9e-18) PF00856: SET" amino acids 370 to 476 (107 residues), 66.2 bits, see alignment E=7.6e-22 PF08236: SRI" amino acids 837 to 919 (83 residues), 52.9 bits, see alignment E=5.3e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (985 amino acids)

>mRNA_2200 K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2 (Rhodosporidium toruloides IFO0880)
MVSPAPASPYYPTPQSPGARSATPGAVAKEGQQGEMDTPMQQGGETLSGQANARESGSAN
GQLHAEPVGSLPDADMQALNGVKSESVHALPTPTADAPAPSFASLSAIKAEPEPLADLTT
FAASAPNAPLANLDRKPSLSSMLTASASASTRSPSPYKREGSTPSTNGDRKPSLPPPYPF
ASTSASVDEIDRKQAFSPVASGSGGSTPARSGSGSGDGDEEEEEVVKPGRGKGKGKKKKV
EVEPQLIGHLPLAEEDAAKTYTELEGCTYYSKALGDVPYYDPDASRCDCSWNTSTRASSP
TLAFELSSRGECAGEPDADEACGEHSNCVNRMMQIECLMGDCRCGRHCQNQRFQKRQYAP
IEIVQTEKKGFGVRAGADISADTFVYEYVGEVIGPQPFQRKMKEYANEGIKHFYFMALDR
DVFIDATKKGGKGRFLNHSCNPNCVVAKWTVGRKMRMGIFTKRDIKMHEELTFNYNVDRY
GHVAQECYCGEPNCVGYIGGKTQTDLGGMDDLYIDALGITEEVEGLGLKGSKKKKGKKLD
EDFTPTLHPVQLEEVPKVSAAIRQALQTRRILEKLLQRVAMTTDDEVQRNLMRLHGLNLM
NNVLREYPSDIHVITLDLEILSRWKLQTRNKIESSKIEENVQKCLAVEDDKVMTLAGDLL
AAWGDLQLGYRIPKAMTDASEDPDRKRSSTFDLEQIAKRARIEHEASKAEEERPRFVMPT
ANNNLNLARPPPYKGKLPDGWEPQWERQLDAYVFRNIHTGEMQREVPYQPARPQIVAPRY
AAPLDANELIAQAERAAQEAKEAEERRVAEEKAAREAAAREREEQRKREKEEKVKQQKDK
RVMGLFSNVVVATMSKYKAHFDSETFKKRAREVTEILIEKEKKRPSYESEAYDSLAPEKE
SKVNSFVKEWVKKLLERRKSSSARPPSSSSSSQTPKRLEPSGTPKPASTPMDVDMPFGLP
QTNGHSNGNGAQSGTPPGTPPLPRS