Protein Info for mRNA_2230 in Rhodosporidium toruloides IFO0880

Name: 10598
Annotation: HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 PF07714: Pkinase_Tyr" amino acids 37 to 185 (149 residues), 77.4 bits, see alignment E=1.1e-25 PF00069: Pkinase" amino acids 39 to 276 (238 residues), 142.9 bits, see alignment E=1.3e-45

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (334 amino acids)

>mRNA_2230 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 (Rhodosporidium toruloides IFO0880)
MAEFVKLSIFGTVFEVTDRYVDLQPVGMGAFGLVCSAKDEARRSSKRTYRKLKLLKHIQH
ENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRLLEKQFIQYFCTRSWSRGLKYVHSA
GVVHRDLKPCNILVNENCNLKICDFGLARLADPQMTGYVSTRYYRAPEIMLTWQKYDVAV
DIWSAGDGHSSPGKDHVNQFSIITELLGTPPEDVIQTICLENTLRFVQSLPKCERVPFAQ
KFRGADPQALDLLEKMLVFDPRKRIDAAQALAHEYLAPYHDPTDEPVAPEPFDWSFNDAD
LPVDTWKVMMYSEILDFHHIDSKETSGPVAAPTA