Protein Info for mRNA_2265 in Rhodosporidium toruloides IFO0880

Name: 10633
Annotation: K08869 ADCK, ABC1 aarF domain-containing kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 440 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF03109: ABC1" amino acids 98 to 225 (128 residues), 88.5 bits, see alignment E=1.9e-29

Best Hits

Predicted SEED Role

"Ubiquinone biosynthesis monooxygenase UbiB" in subsystem Ubiquinone Biosynthesis

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (440 amino acids)

>mRNA_2265 K08869 ADCK, ABC1 aarF domain-containing kinase (Rhodosporidium toruloides IFO0880)
MEASLAATLGVGMASEAFRRSSSPSGGSSQSLLMSEANLERLVAKLSKMRGAALKLGQFL
SIQDTKQLPPQLEAILQRVQNSANFMPEWQTAQVLADNLGDDWQTHFEAFDMRPFAAASI
GQVHRAKLAKVSPLRDRYNGLEELAVKVQFPGVRQSITSDLGTLRWLLVASAALPRGLYL
DNTLRVLGRELEDECDYLREAQCGRKMRDKIASSALADSFDVPEVVDELCGPMVLTTRMM
TGRPLKDVFALDQATRDEIGTRVMQLCMYELFDFRLMQTDPNWSNFLYNPRTRKLELVDF
GATREYSADFMRVYGDLLDAAIAENKDEAIQLSQELGYLTGEEGTAMVDAHLESLFSLAT
PFRDSAPSPFPFGRLGPPITARIRQQIPIMLKHRLKPPPEETYSLNRKLSGAFLLCERLD
SHVPVGKLYRECRRFARCAL