Protein Info for mRNA_2392 in Rhodosporidium toruloides IFO0880

Name: 10760
Annotation: K10364 CAPZA capping protein (actin filament) muscle Z-line, alpha

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 504 PF01267: F-actin_cap_A" amino acids 94 to 499 (406 residues), 302.7 bits, see alignment E=1.2e-94

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (504 amino acids)

>mRNA_2392 K10364 CAPZA capping protein (actin filament) muscle Z-line, alpha (Rhodosporidium toruloides IFO0880)
MTPASPYKASIAFSERRVRSFALHRSLPRLLLPPDKLLLLCDCPFPLPTTASPSHCLPTD
FPPSSSPPHLVLSHFLSLTTKPAMSDAQARLDAASTFLLQSPPGEVNDVLSDLRAILSSS
GLSDSQIESGLLPALTKHNAEQFTVVESEGKKVLVTPASRIEGASEEEEGTERHVEPREG
KEFVFDHLKGLASSASPHTSPFDAETSTLRISLDQLLSSYVSNHYASGVAAVYTLPDPAY
PPPEPAPAAAPSTEETATEPEGTGETGTIAQDVEGGKEEVADVAADTAEEAEKALPEEGV
ETVGGEGAEPTGVSAEEAEAGEKAGEFEFEAVEEDKMDVGTPAAATTAAEEEEAPSATTE
NAAPVPPQPRPSRLFGLYFVGNKYNPSNYWTGRWRSTYQLDYAKGTLEGTAQINIHYYEQ
GNVQLSTTLKSSATLSPSPSPESVVASIKATESSFQRQLGETYNDLSDASFRGLRRALPN
TRSKLDWDKATGMRLGQQIGGGAQ