Protein Info for mRNA_2395 in Rhodosporidium toruloides IFO0880

Name: 10763
Annotation: SMART-catalytic domain of ctd-like phosphatases-SM00577

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 669 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (669 amino acids)

>mRNA_2395 SMART-catalytic domain of ctd-like phosphatases-SM00577 (Rhodosporidium toruloides IFO0880)
MLRRATRFPLLASSSTTPFSPHQCIHTLARPAGMGKEYYRRKDERRDSPYEDRRGRGSGG
GWQSDAVYAEQGNGYGQSQGWQDWQAGATRPYPPPTFAPQPPFFPNQAAPPFGQFDWGPY
GQPYAPQPGPSNWQAWGPPVPPFQPPFPTPNLPFNDAPFVPAPAQPFFHPTAPTQAPFSP
SAPFENGWHSTNPVRSGTRPPRSPARGRRDDNRRAEQDRPDHRVPLPYAYAGDGTYVPPT
RRERMHRREGPAYPPTQTYLDAANGESETFETEEQVGTKEPVVLVLDLNNTLLVRGERNA
AGSKTPVVRPYLATFLEYICTTTEPDLVSGKPRFQPIIYSSARSYNVLSMLAAINLIPPS
RVPPPFDSRAPFPAAPIAEKYRSPSPSRSPTPPPRHGDYVYVQAPYKPEPSEGDVLKLVF
TREMMGLSPMDYHGDVETVKDLAKVWERLGWAEESGSEGGRRATVTSRNGVEEALSPEEV
ARRDEMGAQRTLLLDDEAGKAAQQPYSHLPIRPYLIHQGHMPRFPYIPRNSRSSRSPSPI
SSIDPEIPSYLRALEVRDDHPPAWDDALLRSVWELENLRRESNVAAAVKSGFLQWLRDDA
REAVQKAKEGKKVTEEMVDAELAKRGRMVCERLGIEVRRKWDPRWRQRVLQRREDMLAKA
ERAAGKAAE