Protein Info for mRNA_2432 in Rhodosporidium toruloides IFO0880

Name: 10800
Annotation: K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 412 transmembrane" amino acids 42 to 64 (23 residues), see Phobius details amino acids 81 to 102 (22 residues), see Phobius details amino acids 213 to 237 (25 residues), see Phobius details amino acids 252 to 277 (26 residues), see Phobius details PF01529: DHHC" amino acids 168 to 290 (123 residues), 123.6 bits, see alignment E=3e-40

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (412 amino acids)

>mRNA_2432 K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20 (Rhodosporidium toruloides IFO0880)
MIPIRRPLPAQPLLSFPPEQLAKPAPLPTREDERPRSTALKVLLFLPLVFVFCLLGFAAY
AFLWSLCIEYLLHAHRPLKALLYLLPFSWSLYACGGSFWMAYWRGGGIVPGAGEWKRGDE
EARIAGVGVKREVRGFVEERAEEEEGLLAAEEGGGRRMLQVKSDGSVRFCRKCNVPKPDR
AHHCSSCRRCVLKMDHHCPWLGGGCVGWANYKFFLLALWYTGVLGIYSSVVLFHELVAFV
GEYDDGFELAPISWALAALLGVIFGVAVGCFGLYHLYLACKNRTTIEAMEHPTSLAILTP
PSSHPSHSLTPSQRRRLARAARTYNIYDLGWRENLRQVFGGRKRWWEWGCPWGWPPGDGQ
TFPINEEHLAQLRRITEEVYAEAAAGRHEERTYELGDDESSASEEDGPVRRA