Protein Info for mRNA_2446 in Rhodosporidium toruloides IFO0880

Name: 10814
Annotation: K11396 YNG2, EAF4 chromatin modification-related protein YNG2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 502 PF12998: ING" amino acids 18 to 122 (105 residues), 27.4 bits, see alignment E=2.2e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (502 amino acids)

>mRNA_2446 K11396 YNG2, EAF4 chromatin modification-related protein YNG2 (Rhodosporidium toruloides IFO0880)
MAAQTPTPSSEIIHLTTTYVDALESLPPALTRSLSDLKELDAVLSGSLAGIGDKLRLLNE
MMHTPEPGSKETAEPPKYTPLDRLKLLREVAEDARLFRLGGEDKIRVATNTCETIATHTS
HLATLSTLLLSFLPTHLLPHLPAPSAPHGYPSSNTPASAIARRQLFDYPPPRHPGQGSTS
RLSGALNMVREHYDMTRGAGRGYGASAAAAGKKRAAPIDYSIYGDDYPAVGSSSSLGRKD
KERDPALRHPNQYTKKRMQGYAGGGPGGGQAVGGGYGGAVSAATTNAAAGLYSSIPSHPL
GMTAVEAVKEKRRGADPVAPAMSTSGNGSRAGSVVSGVQGNAMAYSGVQGETDYHMLAYG
VPQRAPAKRKVEDVAGASKRRKKGIDNSPDPAARTLAGNVAAASRVPRRHGSTRLDEPLS
PVHVAPMEDEYEAALAEAEDDGDKTLYCFCQRVSFGEMIACDAPDCEHEWFHLPCVGLKS
IPDGRWFCDECRRNAKSGKKRR