Protein Info for mRNA_2483 in Rhodosporidium toruloides IFO0880

Name: 10851
Annotation: K17541 SCYL2 SCY1-like protein 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 934 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF00069: Pkinase" amino acids 89 to 343 (255 residues), 92.6 bits, see alignment E=2.9e-30 PF07714: Pkinase_Tyr" amino acids 94 to 337 (244 residues), 40.8 bits, see alignment E=1.7e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (934 amino acids)

>mRNA_2483 K17541 SCYL2 SCY1-like protein 2 (Rhodosporidium toruloides IFO0880)
MEFASSLLSSAASSLAAAQKPTLASAYSVDSSVPAVHIGVWKVVRAKHNGGSGRVVSIWT
ADKGTLVGSGSSRRGGASRDRERDAERLKYAVDVLKKEASSLSRLRHPCVLEMAEPMEES
RSTIMFATEPVTASLRQAINASDAAHDSSRRGSYRSKEEQDLELDEVEVQKGLSQLGKGL
QFLHESAKLVHGNLRPESVIINAKGDWKLSGFGLAQDLFSPNGVPAKWEFPAYDPALPPT
CQRDYDYIAPEYICDEMPPAPSNDMYSLGCILHAIHTHTGPPFSNRNSLENLRTNVDEGL
SRNLISSQWRKLPQDVQEVLASLLTRYPNRRMTAAQFLQSRYFEGLLVGTLRFLERDSFA
AKTSEAQASFLKGLVSVLPQFSDKVVRRKILPSLLEETRKANLVPFLLPNILYIAGKMSP
DDFRVEVLPSLKPIFTLKDPPQAVVALIEALPTFEQKCTPTVFREEVMPLVYFALESDNS
VVLEKALRTIPKLCESLDYTTIKQTLFPKITAVFTKTTLLSVKVNTLICFHAMIPVLDKF
TLTEKLVPLLAKIKTKEPSVMIATLAVHEEMGKKCEVEAIATLILPQLWAMSIGPLLNDD
QFAKFMSVIKKLSTRVEDEHMKHLAELKRLEESSGATPLNGPANTGTGAIQAANVTDFES
LVRGNVNGQKVNGLGGRGSQVDIFADDSPAMTPTPTGNAFNSPPLPALPTSSPPFASTST
FAPSAQPARPVASSRLSTSSVSASGRSPLGARTVPSASFNNSAFPSPPAVPASPALSTAN
PARTPSASLKSFAPLQPGPARTPSASSLSASTSSASYSQPNYNLSLSTTPSAGGLPALQP
TTSSLYGSSSSAQPTPPVQWNRVPPLAPSPSPLTPSAAFSPPLQPTSKLSSPLPPGYHPS
ATMQPLQAQRPGGASQGNKPAMDFGAWADLDPLK