Protein Info for mRNA_2493 in Rhodosporidium toruloides IFO0880

Name: 10861
Annotation: KOG3098 Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 465 transmembrane" amino acids 37 to 54 (18 residues), see Phobius details amino acids 69 to 89 (21 residues), see Phobius details amino acids 100 to 120 (21 residues), see Phobius details amino acids 126 to 151 (26 residues), see Phobius details amino acids 165 to 186 (22 residues), see Phobius details amino acids 198 to 217 (20 residues), see Phobius details amino acids 254 to 279 (26 residues), see Phobius details amino acids 285 to 306 (22 residues), see Phobius details amino acids 318 to 340 (23 residues), see Phobius details amino acids 361 to 382 (22 residues), see Phobius details amino acids 423 to 443 (21 residues), see Phobius details PF07690: MFS_1" amino acids 58 to 345 (288 residues), 52 bits, see alignment E=5.6e-18 PF05978: UNC-93" amino acids 74 to 175 (102 residues), 29.3 bits, see alignment E=6.5e-11

Best Hits

KEGG orthology group: None (inferred from 42% identity to nfi:NFIA_062110)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (465 amino acids)

>mRNA_2493 KOG3098 Uncharacterized conserved protein (Rhodosporidium toruloides IFO0880)
MSLERSSTSSFDEKDGSAIAEPATAAVSRRTWFRTSFFQITIVGLCAFLSPGLWNSMNSL
GAGGGQSPFLANAANSIVFGLMVLTCLLGSTITNKLSYRWALVLGACGYAPYAGGLVLNL
KTGASWLVYLGSVTCGLSAGLFWSVEGAIALGYPEENKRGRYLSYWLAWRNGGQILGGAI
SLGLNAKGNKIGAIGRETYYVFIALQAFAPFVAVLLSNPPQVQRKDRTPVKMENHIGLKA
ELKEVWDTLTRREVLWLVPVSLFAQWPSSYVNTFFSLYFTVRARALGSLLIAILSVIGNV
LLGFWLDNKRVSKKIKTRVAFVGLMTIFGGVFIWLTILQTRFLKHKPKLDWTDGRAFSEA
FGAYVIFYIVYYTLQNVLYYIFSELARNPKELIRLSSILRGAESAGSACGYGVSARKVLP
MTVPLGIDFGLWGVAFAAAMFTVKDVGTKWELNKDVKEEKEDEAH