Protein Info for mRNA_2525 in Rhodosporidium toruloides IFO0880

Name: 10893
Annotation: KOG0590 Checkpoint kinase and related serine/threonine protein kinases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1055 PF00069: Pkinase" amino acids 247 to 465 (219 residues), 110.6 bits, see alignment E=9.4e-36 PF07714: Pkinase_Tyr" amino acids 247 to 461 (215 residues), 38.5 bits, see alignment E=8.2e-14

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1055 amino acids)

>mRNA_2525 KOG0590 Checkpoint kinase and related serine/threonine protein kinases (Rhodosporidium toruloides IFO0880)
MTTTHEAPTAHPPSSSHRTRPDSLLHLPYHGRPSLALSTLTTRSSSTSRLPSPLSPSVHS
AIHSQPPWFPEQPVGQRPRGGGRANDRHRVLLRERRASSEDRSAASRRQARAYWSPSGSD
TGGEDSSALDDTSTSSSKGKGKAVAFVVGLGSSGEEDGDATLDVGEAGPSRNGSWSSREP
TVEEIIRAQIPQPIRQIDSQDLDSLLPFGIADYTFSLHPPSPDVSRLTPEPSRDPDKPPD
RKPDRISLGRGKFSEVLLVRKGDTEYALKHTPLHPHHHLISTRLLREPLILAQLLPHRNL
VKVFETIRTPGHFYLVEENLRSSVTLEALVTSSPGEILPLDQAWSVLEQLSSVVKSLHEP
LRVCHRDIKPENILVRLVPPPSSAPPDTPPTLLLKLLDFGLATHFSSSTPKLTTCCGSPA
YHSPELWRGLRDKSGSSRYYGAEIDIWCTGLTVLRCLSTNRYPLGLGHQSMQELADKAVD
ALLGVEDAQIRQVLAGFLHLDGVKRMRAFDRFCETLPQRLKDRAAREGRAEKEGDDGPRE
KKEFKTTTFVPTLLAHRLPLYLDEESHARSEGPRLEAAVVEDGLAALVEQQVLQVPERVS
RSVSSARTVRPTREMYASPESVPSGLTAVRDDSPPSPETETSSTSGTESYFTPLSRPSIS
LASVSSSSRSSSPAPPTPSVESLSFGHRAHPPPIELTLLNPHDEPIRRAVSYIKYALRCK
GILYHVRDESTFSASAFSDALSPYSAPPSLPPTPFMQPYPNFPFADAPTATPSRASSVRS
SRFDEESFTCYLQCVVALPSPNDPDSPEASPFSATTRLRAALDRSETPLRPGLPSRRHTY
TGNSRSASTPPDQPGRSSGKKSKKVDALVFFVSIRKAGSTGPDGASTPVRPSSRASTSSR
RRVASQPTPAGMARADASRIVVTLSDARALPFVRSALAVEDLAAKNGSGDTDAGEGRGRG
RSIGQTYSPRPGQGDNSGSRDARARREKRASSVSVAVEQHAREKRQGEAGVAQGLGMTMG
PPALKPVRRESQAGKGMWEWGLSGLVDRLVGGGGS