Protein Info for mRNA_2531 in Rhodosporidium toruloides IFO0880

Name: 10899
Annotation: KOG2816 Predicted transporter ADD1 (major facilitator superfamily)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 836 transmembrane" amino acids 161 to 181 (21 residues), see Phobius details amino acids 288 to 309 (22 residues), see Phobius details amino acids 321 to 342 (22 residues), see Phobius details amino acids 348 to 367 (20 residues), see Phobius details amino acids 387 to 410 (24 residues), see Phobius details amino acids 418 to 439 (22 residues), see Phobius details amino acids 554 to 575 (22 residues), see Phobius details amino acids 588 to 609 (22 residues), see Phobius details amino acids 659 to 679 (21 residues), see Phobius details amino acids 691 to 715 (25 residues), see Phobius details amino acids 727 to 753 (27 residues), see Phobius details amino acids 760 to 779 (20 residues), see Phobius details PF07690: MFS_1" amino acids 280 to 614 (335 residues), 68.2 bits, see alignment E=6.5e-23 PF00083: Sugar_tr" amino acids 283 to 472 (190 residues), 22.6 bits, see alignment E=4.7e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (836 amino acids)

>mRNA_2531 KOG2816 Predicted transporter ADD1 (major facilitator superfamily) (Rhodosporidium toruloides IFO0880)
MQHPPAPSSEPPSPLSSRLELPPHALASQGAPYEGDVPNVLAEHLLHPPTQRPGLGSRGS
SWASILRGDDERGGARDDEAREGEIAGTEGRRRASKGLSGSREAPIEGPGAGPGDEATNR
AGSAQGEEEEEGGNGRRRGERDAHERSKSRRRKLRWYERPSPIWFFPGTFIIALTMGMTI
APKLEIYTQLICRAMPVEKSGVTLPPPVIEITDYSSPHLSRRAEPTTTWRILFEWSAAPA
KEDLSTAAAGNSSTSMPVLAPAPGAPVRTGDTWSKQCHKSSAVQSSVAQLALLLSLLMGV
LSSLTTGFWGAYSDRRGRKPVLLLALCGTLAMDTVFLLTVHYHHILSYNFLLLGPFLDGL
VGGWSTAQATTSAYLSDVTSAGSRARVFSAIGGLMFGGFAFGPILGSLLITHTDGNVLAP
FYAALAVHVVYLAVMAGVLPESLGEERRVAARERWVEERKVEAEAERAADERDRQTLPFA
QRTGKKFRRVLAKQFRFLRPLSLLLPKPRSDASVAEEDRTNIEWGAGMEMYEHPEEVWRR
GEGKRGRDWGLTKIAMAYASYMMIIAVMSVKLLYANYTFGWSATEDGFFLSFIGFLRVVT
LIGILPLVIKLVRRRPAPIPPRPRPSTPHSASEQWDKEKRWLRVVHDSHFDLGLAKASLV
LDLAGFLLFLSSPCLLATLSTSMRGSPQHVALFLTATFLQSLGSGASPAIQSLALAHASP
RDAGRLFASLSVVQSLSSQVFGPIVFGSVFISTVGKWSEAIFALASALAAVAIGCLMGVR
LRRVFVPASTGEAGVEAGGADAPKPGEEERGRSEAVRAEVGRRRSSAGLKADPTSV