Protein Info for mRNA_2573 in Rhodosporidium toruloides IFO0880

Name: 10941
Annotation: K03848 ALG6 alpha-1,3-glucosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 796 transmembrane" amino acids 140 to 164 (25 residues), see Phobius details amino acids 219 to 239 (21 residues), see Phobius details amino acids 258 to 277 (20 residues), see Phobius details amino acids 287 to 310 (24 residues), see Phobius details amino acids 317 to 337 (21 residues), see Phobius details amino acids 343 to 366 (24 residues), see Phobius details amino acids 410 to 434 (25 residues), see Phobius details amino acids 451 to 470 (20 residues), see Phobius details amino acids 479 to 487 (9 residues), see Phobius details amino acids 493 to 493 (1 residues), see Phobius details amino acids 500 to 518 (19 residues), see Phobius details amino acids 524 to 542 (19 residues), see Phobius details amino acids 550 to 568 (19 residues), see Phobius details amino acids 580 to 600 (21 residues), see Phobius details amino acids 700 to 719 (20 residues), see Phobius details PF03155: Alg6_Alg8" amino acids 210 to 599 (390 residues), 329.3 bits, see alignment E=2.5e-102

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (796 amino acids)

>mRNA_2573 K03848 ALG6 alpha-1,3-glucosyltransferase (Rhodosporidium toruloides IFO0880)
MDGYSSASTSRRRAAPAFQPFPSDWNSVSDSLLRARVQSRNPSHSHRPAYTHSAYSHHSH
GAGTDVRTATGTGWDSASESGLSVLSAFPLAVDERKARAARKAEARERRRRDKERAVKAQ
EATDSPLRRWGRWMLEQPSLAPWAVVLSVAAVVLVKWCTGLGGYSAYHSLFLGLIARLTP
STAHFVTLRPVSTTASKAELRAWDASMARLEDEGDLRNWMRATVVVGDVLVWVTAVLVYC
RRNFGKAEREVKAKRKMLVAAMTILLQPALILIDNGHFQYNSLMLGLTLWAVNCFQSGHD
VLGAVAFMLSLGFKQMALYYAPAVFAYLLGKCFWLGGREGVALFINLALAVTVTFAALFA
PFLTSLTSFLQAIHRIFPFARGLFEDKVANAWCALNVVVKLRDLATVSTLAKLALLATGL
AVLPSVAGVIAVSWQLGQTRTPSSTTVPPTVILLPHALFLSAMSFFLFSFQVHEKSILLP
LMPLTLLMGGRELGYGRLDWEWGVLVNNVAVFSMWPLLKRDGLAVQYLALTGLWNWAVGY
NPLAMRASFVKYLSLLTYTLICLLHALESLASPPPHLPDLFPVLNLTLSAGVFGLAWLWA
TKRLMQEAWALGGLGMGFGGGAGEKGERAAAEKRNGRVTRLVITSSSLAVVVGKDSSAAP
MFRAAARTAFRQPRQAVSRSARRSYTTANPTGPTPQKSDLPWVIGSALVFIPAIVSLTSP
PEILKHSSSHETKHENVPSATKATKAEDPRDPTEESLSHEEKKEGTPEAKEAAKLDQPKK
QDKLENAIAESKEEEK