Protein Info for mRNA_2672 in Rhodosporidium toruloides IFO0880

Name: 11040
Annotation: K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 761 transmembrane" amino acids 151 to 169 (19 residues), see Phobius details amino acids 292 to 313 (22 residues), see Phobius details amino acids 319 to 341 (23 residues), see Phobius details amino acids 362 to 383 (22 residues), see Phobius details amino acids 389 to 407 (19 residues), see Phobius details amino acids 488 to 511 (24 residues), see Phobius details amino acids 540 to 561 (22 residues), see Phobius details PF13637: Ank_4" amino acids 42 to 101 (60 residues), 27.8 bits, see alignment 8.8e-10 amino acids 117 to 158 (42 residues), 28.4 bits, see alignment 5.9e-10 PF12796: Ank_2" amino acids 44 to 109 (66 residues), 34.5 bits, see alignment E=7.9e-12 amino acids 116 to 168 (53 residues), 27.9 bits, see alignment 9.2e-10 amino acids 163 to 246 (84 residues), 40.8 bits, see alignment E=8.2e-14 PF00023: Ank" amino acids 81 to 110 (30 residues), 19.3 bits, see alignment (E = 3.7e-07) amino acids 117 to 146 (30 residues), 27.2 bits, see alignment (E = 1.2e-09) amino acids 215 to 247 (33 residues), 24.1 bits, see alignment (E = 1.1e-08) PF13606: Ank_3" amino acids 83 to 108 (26 residues), 18.9 bits, see alignment (E = 5e-07) amino acids 117 to 142 (26 residues), 24.2 bits, see alignment (E = 9.3e-09) amino acids 216 to 243 (28 residues), 19.1 bits, see alignment (E = 4e-07) PF13857: Ank_5" amino acids 114 to 154 (41 residues), 28.4 bits, see alignment 4.8e-10 amino acids 168 to 220 (53 residues), 29.7 bits, see alignment 1.9e-10 amino acids 211 to 256 (46 residues), 39.9 bits, see alignment 1.2e-13 PF01529: DHHC" amino acids 439 to 576 (138 residues), 97.3 bits, see alignment E=2.6e-31

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (761 amino acids)

>mRNA_2672 K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17 (Rhodosporidium toruloides IFO0880)
MASPLSPQPKSLPTTSLSPSPPSPPPNAQHASTSTAPAAPALPPLHVAAASNDLQSLYAL
LDSPSSSSSIPHTANDTDAEGTTPLHWAAINGHVVAAKVLLERGAEVDARGGELRGTPLM
WAARNGHLPLVHLLLKHGADPSLTDDQSFNALHLSIHSSSAFLVAYLLLTLQPLALDSTD
PEGHTGLAWACYQGDAISVEVLLKAGADKDRKDRMGLTPLHWAVTKGNSTCIRRLVEAGA
DLSQRDNEGKTPRDLALRLKSIAAYDRALIEAGLDPETGRKLDRPLDERNTNWAIFGVVA
GAMGAMFETLAALPWYTSWLLVGAEAFGMHHLVARVLLGVGGAKGAKGHSHGSSSKVTKS
PYLCAVITSSLIWVAYVWITRYISLPDHAVLNILFGLSLVSCAWWFAKAIRLDPGTVRGP
GMGEELKEVVEELVESNQFNGMHFCLSCLTRRPLRSKHSYATERCVARFDHYCPWIWNDV
GVNNHRQFLLFVASLVVGVILFTRLTFGYFYEKAPDLHPDSYCPSLVPSLLCMSLLFDPF
ALSIASWSLLQLTWTIILLSAQIWQVARQMTTLEVANVSRFGYLGGKPGVSAASQQGAVE
KWNAAKAARHAANLAGDVGDGGALDDPESLAHAPSTSPPPGQPTTRAKGSFAFCLKLLGL
DRFVAPSRNSQLTTLAHPPPTASNPFDLGVVANCLDFWTKGGELGVRYERVWGVPEGGFG
ERWRERRREGKAGLGGVRRKWAERRRRARGEGYERVAMEDV