Protein Info for mRNA_2760 in Rhodosporidium toruloides IFO0880

Name: 11128
Annotation: HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 668 transmembrane" amino acids 47 to 67 (21 residues), see Phobius details amino acids 456 to 483 (28 residues), see Phobius details amino acids 510 to 547 (38 residues), see Phobius details amino acids 553 to 570 (18 residues), see Phobius details PF01553: Acyltransferase" amino acids 67 to 196 (130 residues), 34.8 bits, see alignment E=6.2e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (668 amino acids)

>mRNA_2760 HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593 (Rhodosporidium toruloides IFO0880)
MEASQPRLRGAQIDASGAAKSSASSESGNDLADSPHPPPLPRTPAPLAYVLIRWLFRFVL
GVFYSTVVVEGAENIPEDGVPCMLTANHCNSLTDALLLVTTVPSSRRSFLRLTAKDTQFG
RGTFTSWLIESAGTLPIKRPNDHKGEKVDNSVVFATLIRALEKGHMTVLFPEGMSRYWPQ
IAELKQGVSRIVADTLTRQKDNPKFELAIQTASITYLHRNLFRSDVLVTFHKPIYVSAHT
HPDLIAPSHPSTPSPTPSAHERAIRSLTATIGASIRSGILDAPSWSVIRLANTARRLYAP
LGTKLSLGDHVRLTQRFVDALMGKRAERTWDEMVGLQGAEGASGLKSGAVEKKREREREK
RPDVPRGLTEEVLKTPLVEKGKKDGAQAGYFAIASPPSSVKNGDGARTEDEADDEELERL
RRDLKTYQDLLYLHGIKDDRIRNPRLLRRRTLLKRLFVRLVGSICLLTISIPGLCLWLPI
LWMSKRESDRLVRKGPVFDTYDEIAQTKLTYGLLTGLAVLALSSLLTFPFLPFLNLPFLL
GLMWLTLRFLEDLFSSLRALLALARLLMLGKRQLVLLRSMRADLHARVEQLAVTRAGLPR
DAGVFVRERERRWKRMGLGAVEGGLRKWLGFAAFFDPRRRRKKDWNEALKLFDQTEFQED
DVRPPGVS