Protein Info for mRNA_2787 in Rhodosporidium toruloides IFO0880

Name: 11155
Annotation: KOG1848 Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1565 transmembrane" amino acids 254 to 272 (19 residues), see Phobius details amino acids 336 to 356 (21 residues), see Phobius details amino acids 374 to 394 (21 residues), see Phobius details PF16206: Mon2_C" amino acids 768 to 989 (222 residues), 67.8 bits, see alignment E=6.4e-23 amino acids 1142 to 1426 (285 residues), 45.4 bits, see alignment E=3.7e-16

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1565 amino acids)

>mRNA_2787 KOG1848 Uncharacterized conserved protein (Rhodosporidium toruloides IFO0880)
MRVLALEIFRGLCSDFGLMMKVYQRYDSATREAEERSGAGNKGKGRASPAGGSTVFSDMM
TAFNRLATEKPSVLGVGAAVMYGSSLGPVFSSGAGSSAGHASTGMSPAASSTGVTGSAVI
DSAMEMGYGLAQAAGSVVGSSVAAAAGAVSAAGGAATGPSLDVQTASMKLQCIDQLDKAE
PPQIPETYIFLLDLQCLSALADGFASFTLATYGDVVCRQQTTRGLAPPALDWDNLDERDP
QVASLRVVRSMAESAWPALLASMSFFIATALSDDLFSDVVTSLQNFTSVLGVLNLETPRE
AFLTSLCKFAMPPAVVSHIASQQDTFSSHASKPSSAAAAATAVLSAGAESLALLAGGSSA
PSLPVGLSSRNLACLRALMSVAHYLAGSLGYSWFCVFETLQNADFVIRATSAAKSAKKRT
QAPPTTAHGTPAKAGAGAGQPASSDQANIPIVPTEADELAVQQAIAKLFDVSFNLDDGAF
RQFLGALCRLSGEMIGLQMAEDGTVAQYAGGDDRSEDGSTGTTTPLDTPDRSRRRSSGIS
TSRGASTKGGDKSFGIAKLGAVALLNVLRLVQRPPDVGWELLTSHLLFVLHSTSTSTPIR
LQAADVFGAVLTAAIKALSASDLASDIDLQERAQTQVLDALAAQAEPAPRLQLTPDVEIR
RLALDTLLKILEANGHSFVTGWSQIFHILRTACPTASFFAPPSPVVPSAPRRSLDTITEH
DGVGPMTPMRSSLGANGYFNLGVDGAAKNAKSAVLVRTSFPSLQLICTDFLDALDVAELR
DCITTLSEFGKQAEDVNVALTAGGLIWGVSDNVQAKRKEGDSEAAHGELWMFLLHNLLAL
CRDSRQEVRDAAVTNVFRSISMYGSTLDDSTWDACCWEVIFPLVDDITSTIRRRNDPGAA
EDEDLSEETVPQPNAPPIRLVDKQWDESLTLALRYLGDVFFDYLSQLVKVDRYDEIWAAF
VDRTKESFIRDRPVPATAAMQALEKVLTVSLDMSAAERIGKSWEVAWQAWDDVGAAIEEN
ARAGPDEEKVYTQINLEAFVHVALPIYTPPHITFDLARIQRLLAVLKTALTYQRSPDYRA
DVDGLMPLQSAVLEVVAVIKLDDVPGAASAVLSDLSEYLKFAFVAPFETSPASGMGLGGQ
RVTYVALAKEVMPHVQWLYRKYSDEPSVYEQGAVERMLQAYTLPMRLKHDCPAPAKFGSA
EPLWKTATVNYLKAVRDVVSALGTLDLPAQTEEAVWEQLVEGFAEALLASSRDSATQRGA
DLHREEEFDLALLASLEHDVLPHIGSPRVPDDLIRRLAKALQLASRLYRLDLPGPSTNSR
VEARFSLDFDEQVKGEMFGTTVEIVENRKERFAYWCLDMLFLVCDGDEASEPARQRLAAL
SVPSLLNRCAAIIKTYIADAPLRGKMPFPRIRQEELIYVLQRISALRLAPSTLWASTQPS
PSSAIASPTPLSSSSPRDLVRDAMLRSPLAHLYELHNLFTDLLEVARNELSIVQAYMPQR
LAVGLREEDDEVEWEGLPAGCKVGAVGRRRRGGVGHDEGEMDVAKLALRCLKLVGEEIGA
GLSFV