Protein Info for mRNA_2883 in Rhodosporidium toruloides IFO0880

Name: 11251
Annotation: K16675 ZDHHC9_14_18 palmitoyltransferase ZDHHC9/14/18

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 609 transmembrane" amino acids 319 to 340 (22 residues), see Phobius details amino acids 356 to 377 (22 residues), see Phobius details amino acids 477 to 496 (20 residues), see Phobius details amino acids 502 to 525 (24 residues), see Phobius details PF01529: DHHC" amino acids 435 to 502 (68 residues), 84.5 bits, see alignment E=3.9e-28

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (609 amino acids)

>mRNA_2883 K16675 ZDHHC9_14_18 palmitoyltransferase ZDHHC9/14/18 (Rhodosporidium toruloides IFO0880)
MTSTQPYDPPTSPSPLPSSPSLNPPPRPHQHPNSPPVRFLSVTEDLATRPVSPQPGNGGF
GMRRSASRDSNQAGVGAGLGVSGVSVGSSGPVERSLIAEPAFGTTATPQSSTSRSQPPSS
PSHPVSPALHVSPASVSPSPDVTSDATLGRKSPTPNLLLPRSHSPRPLSSASFASSHNTG
PTITRIASPMEPSTTPTDDTVAPMPVARRQSASDLLSLSPPMEPLTELDVLKDLASGGTI
ARSRSRNWGNEISGDSGWSGTNETGEQAAKPSTEPLLVRTSNVQPPSSALGPLPAKGSAA
SGYPPRPRTRHRQSADSPLAFYTSFVIAILLPALFLVFNADWLWHTNEGGTRWGKALVVV
VAVASVIVWVLMLITALSNPGIIPRNLDPDPPRHWIPLAPNASSTDAKEGEGEGEWRVEM
RYVEVLGGKAVVGCKWCETCKTYRPPRTSHCRLCDNCVERTDHHCAFLNTCIGRRNYLPF
FLFLLSATLLASLSIALSGVHIAFAAVVSAPVGCLAVYHVGLACAQRTTIEMLRPPLIRF
ALLDPSTHLPFSTTPSTDGIVSTTNPWTTGNAVKNCVEVVCFPGKERVRVEGEGGSRQRS
GVREANGRI