Protein Info for mRNA_3075 in Rhodosporidium toruloides IFO0880
Name: 11443
Annotation: K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (2546 amino acids)
>mRNA_3075 K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK (Rhodosporidium toruloides IFO0880) MAATTLADGATSPTAVPGDDKRLATDSTSDGSSASASSVPAATFSSATLAPPSSTRSTPS SATASTDSSTAAARASSSTGTGTGTGTGTGGTGSAGSATPSGVQSRRSADAGSNPRAHAR AERILAETFDASPSSSSKDSQSSGGRKGLVASTLLEGGAQKSHDPSRTAEGAVKAMYEQR AQREKDEKEREERVAEREEALEDERREREKREFEMGDRWSWRRESDDGASLRGQGGGAGS LDGTAASSSGAAASSSGKAASGSGAGAGAATAAGPGSSSSRGQGLALRDLLTPVWRNGKW KEMMAIREDAKTRRSSGRMQTSAQEAGAGAPFDKSTSHGPAPNDRDSVEGDEEEIELIAL LSRADAQECLAMLANVVEPLHPSAMTEERRQREVPLAQLNHTVLLELNFPESSIYRHPPG SNFSHQHSNSDVQHQPRGESEPTQGVPSVYQAMQRRQSSSEQRTAMHAPGTPPAVPILPR NPPSDRTMPVYSQTNAYQTPLANSSDGTPRGSVSSSTGVGLGIPGSNRTSFSTNASTSPS PGPNPPASNQNPAVPPAHHGVQQETHLLRPFLQLVATLHEDSDLVIVTSILANMPLPVSV TGSPGQKERDEERKREKAVRKEERKVAREAKREEREKAEADSREAEKDKQESSTKAEQVP PLPLPRGMVDGLDGGENGVGSNATSASGSPRQLSSNKSTPPTSSAPFPQGYKPSRPPLAQ RGTSYSSLSGASSSGSTVVGTALNAPPIPRPVSPRSSTDLSLPHNPDQPLPPTSAEPTYH SRGLSAPLQTPAISDELKELWADMDRSGTFKNEPPVGFVEEKESRAAIRRRGAGPLSVSS QRDYDNEVRERNWQRREKKRERERQREKDERDAGRGEGLSELAELDEPSEHDDEGEEALE RERDRDREEGSEDEDGIRRLDEESEDAEDGEDEEDGGDDGEDDVDLDRLRRQTRTGSTSS AGSAHEREEAQRAARADHPMTPQEIGPSRSISQQRPRLEDAVSATGSQTSSVSSASSRAS RVSTSVHPPRLSGDAGLVVHELPSAADVSGRISHTFDDPFLNTVAQTPCGRLIISVDWSR TSLGAISTWGAEVRSHIMSMLASPFHTAIWLGEDSVLLYNDAYSRILGPSKHPAAMGKMG AEGWQEIWETLGPLAAQVMLGKTMSFSDHCNCIYRNGMLEETYMTWAFMPVRASDASIIG YTNPSFETTARVIAERRLGTLRELSQLTQLARTTKDFCTKALRGIASNPLDLPFAILYSC ETTTINPGRRTKGSASTESSGVKQSSQSGEPPQTSTGMDGSSTVARVHLNLQGSVGVPKG HPSAPAEVDVLIDTQISQDSKAGKSNASSASTNSTNEDNSTSTVWPFVEVLQSHQPIFIS ELGQRSQGFEHRGWPDDVHRAVVIPIRVEGSAVPKAILVVGLNPRRPWNSVYAVFLNLIT RTLSTGLLGIEVAEEQARKSQELVELNDARQAFFSNVSHELRTPLTLILGPLEDVMHSNA TKLDRDDREKLDVVLRNAHRLLNMVNTLLDFSRLESGKMNTKYRPTLLGPRVVELSNLFR AAIERGGIEFSIDVQPDKYADSNPFYLSDEMLDKIILNLLGNSFKYCLAGWIKVKVRFTS SEGLISISDSGVGIKEEDLETIFERFARVDSNARSFEGTGIGLSLVLELVKALGGTIDVE SKFGAGSTFTVRLPRGYAHLPQEAIDHEPYESMTLPPRAAQSLAIINDAAAWRTVPKDGR KPDGGADGDSDGGAVGRRADSAKSVSPTRRASDPEPVPSVFNLEKQSTVCLVVDDNAQLR AFISNTLSKMFTVVEAANGREALDYALNHPVSIVVTDLAMPVMGGRELLAALRKDPKTSL VPIIFLSAQAGSEARVDALLLGADDYIVKPFQARELMARVNVHLQLGQMRKELERRVTER TAALLESEKKLKELADQHQTLALVSPVGIFQTDREGNMVFVNPQFSVISGHPEGVPHTEW PNDIWPDDRLKVEKLWSDAVSNWAPDKHASFEYRYRKGNWAQLEIRSFEKGYIGSITDIT HQKEVEAFHVSEVEQRARDAEENRRNTEMFLDMSSHELRNPLSGVWQNAEVVAVSLEKIT QWLDDLRNGGKTLDPPTLEEMHEEMLENLDAIESIQICASHQTRIADDILNVSKLNMGLL TINVAPFDLVAAVGEVVKTFEVTSHQQHIQLSVQRGESLDKLKVDWIVADSGRIKQILYN FLTNALKYTADSQRKAVTVHLDAFETAPPTPSNAMRIASTDQSLEPPPDCVWCIVGVEDS GKGLTSEQLKLLFSRFKQANPKTDQYGGSGLGLYVSKKLVELHRGFIEVASEPGKGSTFR FAIPASRAPRPTSSSLSPQPHGLALGPKRLKRPTSSSGRAPTAAMQALASASATSPSPTP STGSHPLRVLVAEDNLINQKVLFRQLKNAGYEVTLASNGNEALKHLEEDIAKPPAAQFEV LLLDIEMPEKRGDEAAQILRQWEKDGKTSRRYPIVALTANARVALTDSYLAAGFDDVITK PYQLQDLLTRIRNLVSPTRLHQAAST