Protein Info for mRNA_3131 in Rhodosporidium toruloides IFO0880

Name: 11499
Annotation: KOG1230 Protein containing repeated kelch motifs

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 754 PF13418: Kelch_4" amino acids 85 to 133 (49 residues), 39.2 bits, see alignment 2.1e-13 amino acids 197 to 245 (49 residues), 25.6 bits, see alignment 3.5e-09 PF13415: Kelch_3" amino acids 97 to 144 (48 residues), 31.7 bits, see alignment 5.2e-11 amino acids 152 to 205 (54 residues), 29.8 bits, see alignment 2e-10 amino acids 208 to 261 (54 residues), 23.7 bits, see alignment 1.7e-08 PF13854: Kelch_5" amino acids 195 to 235 (41 residues), 29.5 bits, see alignment 2e-10 PF13422: DUF4110" amino acids 663 to 730 (68 residues), 69.1 bits, see alignment E=9.7e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (754 amino acids)

>mRNA_3131 KOG1230 Protein containing repeated kelch motifs (Rhodosporidium toruloides IFO0880)
MGKTKAKAAKKGVDAKAAAKAAKKLKQEKKAAKSDTKAIKKKKGKDKEEAWEEDDFLTSL
EQFKQKWAEDHKVSEDIVEGPPSRRANCTLTASPVSDHLFLFGGEYFDGQKVEMYADLYR
YDPSKNEWRRFTSPTQPGPRAAHQVVGTAAGGGKLWIHGGEYSAPNQTSFYHYHDLWSFS
LDTQQWERWETKQRPSARSGHRMVAWKNYIFLFGGFQDTGIRTTYLNDLWAWSLTECVAF
RWHKVEFSELERKPPARSGFSFLPTTEGLVLHGKSCHPRYPNWGKRVTGVALNDTWHLKI
PPLAEDGSLDWKKFKWEKRKNPGNPPNPTRSGCTMAYWANKGMGILFGGVSDDDKDEETL
DSTFYNELFGYNTTGNGRWIQLMLRRKKKIGGGGNKKKEKRKAAAAAAAALAAANGTAGE
EGGDGEEGEKRRKEGGGSDDEDEYMSSDDDEPKPWEIARARREMEREMERAAAQAGMSVD
QHAVASAAESGAPVVANAAPENDEDDPDRTIPGPRYNVMSAVLRNTLYLYGGILEAGNRE
YTLADFHALSLDKLDRFTCLREDRIDAAEWHGSDSENDDDSDSEDEDGSMSERSDGEGEE
GEEDDGQAPEETEPMEIEIDELALTEAELAAKKAEKERIEREALQKKAQAFAGVSTDAAR
TAEEIVSTPQPGETRAQFFDRGREYWTQKAHELNAGARGKELRRDGFALAEQRYEEYKPL
LEELARMQEQAGIDAAAAKAGARAGLGAESRNRR