Protein Info for mRNA_3353 in Rhodosporidium toruloides IFO0880

Name: 11721
Annotation: K10352 MYH myosin heavy chain

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1638 transmembrane" amino acids 264 to 285 (22 residues), see Phobius details PF02736: Myosin_N" amino acids 29 to 65 (37 residues), 31.1 bits, see alignment (E = 1.7e-11) PF00063: Myosin_head" amino acids 85 to 796 (712 residues), 831.8 bits, see alignment E=4.3e-254

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1638 amino acids)

>mRNA_3353 K10352 MYH myosin heavy chain (Rhodosporidium toruloides IFO0880)
MAQPGHRRLRSQHQLAQDQAALAQWNANKWVWVPDQEKGYVAGHVVKENAEEGTSTVALD
SGEEMRTVETDLLTRVNPPNFDGAEDIADLTYLNEASVVHNLRVRYQRGEIYTYSGLFLV
AVNPYRSLPIYTPQVIESYKSARRDQNPPHVFAVAEKAWQNMLQQRDQSQSVLVTGESGA
GKTENTKKVIQYLAAIAADPFPTSSSFDLLARQAHADATLNSSGGKAKKLGQLERQILEA
NPILEAFGNAQTVKNNNSSRFGKFVRIFFNSLGAIAGANVDWYLLEKSRVTARSKEERSF
HVFFQLLRGADQGLLKQLLLSDEASSGSKAFEYLKHSRQDVDGMDDREEWKALVRALDTV
GFTSFEQLSLFSIIATILHLGQLTLSVSGTSTAHLSSRAALEKAAFLLGVSPDSLHNALL
RPKVKAGREWVTQARTKDQVVDEIGALSKSLYEKNFGALVDRINRSLEGGAVLGPQGKKT
FIGVLDIAGFEIFETNGFEQLCINLTNEKLQQFFNHHMFVLEQEEYAREDISWDFVNFGL
ELQPTIDLIESTNPMGVLACLDDASIMPKATDASFTDKLHQLASEKPTPTPFTKYAPSRL
ERGFTISHYAGKVEYRTDGWLDKNRDPLNDNITSLLATSSNSYVATLFAGYAEPEAGSTL
DVVAPRARVRKGAFRTVGQRHKEQLAVLMSQLNETQPHFVRCIVPNLHKSPTEIDVPLVL
DQLRCNGVLEGIRIARLGYPNRLPFSEFRRRFELLAPAGSIPKGFVDGAQACSTILSHLQ
LDPHTYRIGLTKVFFKAGILAELEERRDDYLSGIVTKVQAACRRFVARRQAVKVLHRAQA
VRTIQRNARIYAELRDWPWWPLFQRVRPLLAAARTDDELRRKEAELVEAKKRAEAEEKER
EKLLALQAELEQAQQEMAQRLEAEKSLSVEKEALLLRSKEREAALQDALQAAEQDYDTVS
SQLDRAMEAKRAVDERLAGLNDAYANQTKLVETLQQAQAAWKAKEAELASQTSVQTAEWE
RINSERQKNADLVLDLKRQLSELNQDRRREQERLNTSLKTAQERLASETAASTEARKKFV
SLEADARAAKAEVAALQLAQRDNEENLKLREAELARLRSDFAAAKEQAEEASARARKAEA
AVASLQQQLEAKTAALQSSRTAEERAAGDLLALKKLVDKQASDQQRTAELAKMREADIQD
LRFQLSKTSSELAIAQRESAKKAEQLQTELNSARKDGQEAQAAKQELERKVASQSSTITR
LEARTEELERAQQAHDLEIELLRTKTAEQLLQEREKWEKQLRKTRDQFEVLEDAAVQAKR
DRDAALRDVEAYKALLEGEQETVRARVAEKAKLEAQVDQQHLVLADLDKINGDLRAELAS
TKARLVVAEEKAGRTVVEHIRVLEEAQRLQNLEMDRMRADRDKRDAYVRTLERARTALTQ
SLEDVRTAADCDGPQLADTFREQLQHEREAERRAAFANRAPKDPTVDRLNDALASEKKVR
ELAELNVSRLRSEVEHLNSSLDSSKAEVADLKRRNAQIERELQKVAASDYGQNGASPVKT
FAPTLRDPQPRTMQESRLANVSPEPPAPRANGLRSEGPYGSGYGGVHASRTSVDLKRASL
QFAPPPAGPNSPRRRNYE