Protein Info for mRNA_3373 in Rhodosporidium toruloides IFO0880

Name: 11741
Annotation: K00390 cysH phosphoadenosine phosphosulfate reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 308 transmembrane" amino acids 41 to 61 (21 residues), see Phobius details TIGR02057: phosphoadenosine phosphosulfate reductase" amino acids 19 to 248 (230 residues), 265.4 bits, see alignment E=5.1e-83 TIGR00434: phosophoadenylyl-sulfate reductase" amino acids 31 to 249 (219 residues), 231.7 bits, see alignment E=9e-73 PF01507: PAPS_reduct" amino acids 46 to 223 (178 residues), 137.4 bits, see alignment E=2.7e-44

Best Hits

KEGG orthology group: K00390, phosphoadenosine phosphosulfate reductase [EC: 1.8.4.8] (inferred from 61% identity to cne:CNB03860)

Predicted SEED Role

"Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)" in subsystem Cysteine Biosynthesis (EC 1.8.4.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.4.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (308 amino acids)

>mRNA_3373 K00390 cysH phosphoadenosine phosphosulfate reductase (Rhodosporidium toruloides IFO0880)
MPSSPVASTSSIPFDPARLDEINASLADASPQDVLTYAIDFIPGLFQTTAFGLTGLAATD
MISRISRKRKQPHAVPLIFLDTLYHFPETLDLARRVEKKYQLELQTFRPPGVETVEEFEK
KYGEKLWETDEDTYDYLVKVEPARRAYDTLGVKAVITGRRRSQGADRATLEPIEIDSTGL
VKVNPLCRWGFQEVKDYIDMAGVPYNPLLDQGYKSVGDWHSTVKPKDGEGERSGRWASNK
TKTECGLHKDYFAMKRAFEKKQLEQARAAADKARGDEEVGESSVDLSQETDATSQDLGAS
FSDLKLGA