Protein Info for mRNA_3380 in Rhodosporidium toruloides IFO0880

Name: 11748
Annotation: KOG1650 Predicted K+/H+-antiporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1008 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 59 to 80 (22 residues), see Phobius details amino acids 92 to 108 (17 residues), see Phobius details amino acids 119 to 141 (23 residues), see Phobius details amino acids 153 to 176 (24 residues), see Phobius details amino acids 188 to 209 (22 residues), see Phobius details amino acids 220 to 245 (26 residues), see Phobius details amino acids 251 to 273 (23 residues), see Phobius details amino acids 295 to 328 (34 residues), see Phobius details amino acids 340 to 358 (19 residues), see Phobius details amino acids 370 to 392 (23 residues), see Phobius details amino acids 404 to 421 (18 residues), see Phobius details amino acids 429 to 431 (3 residues), see Phobius details amino acids 433 to 457 (25 residues), see Phobius details amino acids 496 to 517 (22 residues), see Phobius details PF00999: Na_H_Exchanger" amino acids 66 to 447 (382 residues), 150.7 bits, see alignment E=2.6e-48

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1008 amino acids)

>mRNA_3380 KOG1650 Predicted K+/H+-antiporter (Rhodosporidium toruloides IFO0880)
MAASTGTAAALVTFTATATAGQVWSSSVSQPTGGGGHETTILSGGHDINPIRFDTSNPLV
LVIVQLVLILALSRILALAFRWARQPRVVSEILAGILLGPTAFGQIPGFTENIFPAPSIP
FLSLIANLGLVLFLFVIGTDVDFSLLRRNLKPTVAVSAAGLVIPFGLGCAVSVGLYNEFI
SKEVKFTTFMTFIGTSSSITAFPVLSRILSELQLFTDPVGLVVLASGVVNDVIGWCLLAL
SVALASAGQGVVVVYILLTMVGWTLALFFLARPALNWLARTTGSYTRSDGPTQGYVCATL
ALVLISAWFCQIIGISEIFGGFLVGLIVPRTLGHHFASRIEDLVVCIFIPLYFATSGLRT
NLTLLNTGTIWGWVICVMVVAFSGKFLGSAIAARGTGFTWRQAGATGSLMSAKGLIELIV
LNQGLQVGIISTTVFSIFVLEALVLTIASTPLTLAFYPPRHRPSTKHTPPISSTLDSKPR
SSLDKSSLSLRMRTRFIVMLDQLESLGAAMVFTHLLASVPVTDGEAAKVGGSSQGGATLT
SGDGLLAPTHEGTTSTTSTSPASTPLPPASQQQQLEVTPLRLVELTERGSGVMLASEEAA
SHLARDPLVSLYRTFASLPSSSGVHVATGEFAMTAAENWPETVARCTEEGAAELLVVPWK
LGSASGPREEGNVVESFIPNPFEALFGNAVPGSLTSAQVSGAPLFAAFLRDVFLETSCDV
GVLLDCSCPSAPSIAHAPKHLYVPFFGGADDRTCLEIAVQLVKRSAGAVTATVLVVTRAA
EPTEEDQAANGLDRSDTDGAEATSTTKLDAIFSPALSIPPSSPAAHSHHLSLGHGGTHHG
GTRAGETHYGSSHGQHALASATADDVALEQVSSVAAILPAGALVIERVSTAFPLATAVTR
LRSLTATQPTLTLLGRSRLDAPSHRLESLTLLKSAERAGTLGACASSEVRRAMGEAATAV
LVAPAEVGAEWVMVVQSRATAGKRAQKRMVAAGRSLSVGTVYGEKGEA