Protein Info for mRNA_3418 in Rhodosporidium toruloides IFO0880

Name: 11786
Annotation: KOG1502 Flavonol reductase/cinnamoyl-CoA reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 343 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF01370: Epimerase" amino acids 10 to 259 (250 residues), 48.1 bits, see alignment E=3.2e-16 PF16363: GDP_Man_Dehyd" amino acids 11 to 124 (114 residues), 29.1 bits, see alignment E=2.1e-10 PF01073: 3Beta_HSD" amino acids 12 to 138 (127 residues), 41.6 bits, see alignment E=2.4e-14 PF13460: NAD_binding_10" amino acids 14 to 141 (128 residues), 33 bits, see alignment E=1.8e-11 PF07993: NAD_binding_4" amino acids 70 to 207 (138 residues), 27.4 bits, see alignment E=5.7e-10

Best Hits

KEGG orthology group: None (inferred from 40% identity to aor:AOR_1_722034)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (343 amino acids)

>mRNA_3418 KOG1502 Flavonol reductase/cinnamoyl-CoA reductase (Rhodosporidium toruloides IFO0880)
MPTAITPRLVLISGVSGFLGTATTLEFLKKGWKVRGTVRREEQADAWLEKYPQYRDQIHF
VIVRDLADDGAFDEAIKGVDAVAHTASPFTFSFKDNVKDMLEPALKGTTSILEAAKREPS
VKSVIITSSLAAAQDPAKGLDPGFVRTSAVWSPFTWEQAAKETIPAMVYLASKTFAERAA
WDFFEREKPNFSLATIVPPIILGEALQPLSSLSDLNLSAAVVKHIIDAEEIPPTAVPVFV
NVNDCARAHVEAIERARTNRYLLIGGDNDNCVIAQYLREDFPEQAHRIPTKGNPVGPHWS
YDCTPAAKELGIEFTDLRTTIKQAGEQLFRLEKELPEKKQAAM