Protein Info for mRNA_3508 in Rhodosporidium toruloides IFO0880

Name: 11876
Annotation: K00273 DAO, aao D-amino-acid oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 364 PF01266: DAO" amino acids 56 to 339 (284 residues), 85.5 bits, see alignment E=2.8e-28

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (364 amino acids)

>mRNA_3508 K00273 DAO, aao D-amino-acid oxidase (Rhodosporidium toruloides IFO0880)
MAAQQNKSHAQPSPVLLKRGYPVLLFAHQLPGDPLSPDFASTAAGAHHLSFAGDDDWRQR
SFDMRTFERLWAESEDAAKGEERGVMRLTQTELYKGDLHLRFLEGLPDFRIHDASTLPDA
IEHAVSFTSMTIEPARYLQRLLNEFTLLGGSVRRVPQLAALSDVRKYVRAPLAVLNCTGI
GACTLTDVKDTTVRAVRGQVLKLRAPWVKAGWTRQIGSLAGGEGGERTYVIPRASGEVII
GGTREVDDYHPDPRPETTTDIIRRALEICPSLALPPSTTEPIDVRSIIEAEVVGFRPTRD
AGIRLEAEELNTDDGTMLVVHNYGHGGYGWQSMWGCAEEAGKIVGEEIRKRGKNGAAVLV
QAKL