Protein Info for mRNA_3513 in Rhodosporidium toruloides IFO0880

Name: 11881
Annotation: K11718 HUGT UDP-glucose-glycoprotein glucosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1693 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 1365 to 1386 (22 residues), see Phobius details amino acids 1448 to 1456 (9 residues), see Phobius details PF18400: Thioredoxin_12" amino acids 36 to 256 (221 residues), 58.4 bits, see alignment E=2.7e-19 PF18401: Thioredoxin_13" amino acids 358 to 479 (122 residues), 83.7 bits, see alignment 3.6e-27 PF18402: Thioredoxin_14" amino acids 503 to 772 (270 residues), 214 bits, see alignment E=1.1e-66 PF18403: Thioredoxin_15" amino acids 824 to 1012 (189 residues), 114.9 bits, see alignment E=1.6e-36 PF06427: UDP-g_GGTase" amino acids 1204 to 1318 (115 residues), 118.8 bits, see alignment 3.8e-38 PF18404: Glyco_transf_24" amino acids 1363 to 1629 (267 residues), 480.7 bits, see alignment E=3.8e-148

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1693 amino acids)

>mRNA_3513 K11718 HUGT UDP-glucose-glycoprotein glucosyltransferase (Rhodosporidium toruloides IFO0880)
MWLSGLQSLLLAGLAASAAAHRSPPVAARVEAWPAPDLVTQFLETTALEAPNEFFHFLSF
LSSNPHSHHFLRAGTLLPQSLRAANNLAKQGVNPIFAPEGTLQQNETYALLDAAAGRSLL
FRSKGLRESLQTSLANREASVIIEGMRGLWEEREAVVPVREGSDSQDEEACESWIDVAGV
RACSEDEFWEIVGRDEKGGKKPIKLPSSANLTRPQRYSFDHVSPHGDEAHLPRFVFWANP
TTPSFQRLFIFLHSLSAPKAMPVSNPKSLTSQSTPASHAAPHPPRLQFVLRWKPSSAAHR
AQKKLVMSGYGAALDIKKSDYLAIDDRVTGQSTAGGKGADGEVSKEPVLEIEGDLPPKME
PVKKGDVAELAIRTAQFILASDRPFKAFVDLTAAFPRLASHLPTFVPDPDPHLISEVSTN
QMSSALTTRPSFFLNGVPLNEAEVDPFALLRLMRKERKHIVDLLSLSIHMTGKEARDILI
GGSPRSPSSSRDRIGADALGELYDSTDRDEGGQVILWWNDLEKDRRYKSWSKSVRELLRP
VYPGSMNLVARNLNNVVFVLDLMQPEALSLVVEHIKQFVGRGIPVRFGVVPIVGPSSEDN
SLQTLMAQVTWYLTDALGRAPTMQFLATLLKASPESPISEDLLKRAYLQLAATASHVDGG
PLARFNELRHYGIGKRAGGSHSRLTKTREYLKRLGVSLASTIEAKRSLGAFFMNGAYFPI
DDDFTQNLQRTLGLHTQYLAQEVYLRSLNDDMDASSFFADLPTTYKRRNPYIFPSPETNP
LKIVNLVEALDGVHRGWIHSFYIEGTSGLTNQTTGLDIEDPPAVATIYVITDLNDPAGAD
LAVAALKLAEKTTQVRISFVHNPTDPFAERHPWTLSRALFALQKDHQLAEILPDELIEYI
DLNIDKGGPAKGDGHDWPEDNPLRAILAEGVRDKMGGDADLFWDEVQWFRYKLGFKEGES
GIVINGRVIGPLPTGSFGVADFKTLLAYEMEKRIKPVVAAIDSTAVLKENFDRLKRSHIY
NVAASVVGAVHLPDPAAGIFGNGPVERRRDYLGLAANHSAIVGERETGALFEVAVVIDPA
TELAQRWAPIVSTLSQLNSTHVRLYLNPSLHVTEVPIKRFYQYSFDSTLTFDDTTGQEVQ
PAIRFDDIPEDVLLTFGIDAQQSWLAFPKHSVHDLDNIRLADLPAWSKASGVEAVFELES
LLVEGHARDMPSSRPPRGLQLELRRGGHNASEQQQRVDTTVMANLGYLQFKASPGAWQLG
IRPGRSSEVFELESIGADGWKSGSVNKTGTTFVVSTLEGLTLYPRFTRKTGHELTELLDE
SADVVASARTAAAGLFERVKSMIPFLAPKTGQELMSTGKKAEINVFTVASGLLYERMALL
MVVSVLRHTKSSVKFWFIQNFLSPSFKAFIPHMAREYGFDYELVTYKWPHWLRAQKEKQR
TIWGYKILFLDVLFPLELDSVIFVDSDQIVRADLKELVDLDLQGAPYAFAPMGDDRAQME
GFRFWKTGYWKNHLKGNPYHISALYVIDLDRFRQIAAGDRLRQQYQALSADPHSLANLDQ
DLPNNMQGTIPIYTLGREWLWCETWCSDESLAQAKTIDLCNNPLTHEPKLQRAKRLIPEW
LEYDAEVSAFAQRVAAGQEGGDTAASAFRDRADELEQAVQQAKEREEFVEEQQQARSGSG
KGDSREQRVKDEL