Protein Info for mRNA_3590 in Rhodosporidium toruloides IFO0880

Name: 11958
Annotation: K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01146: ATP synthase F1, gamma subunit
  • amino acids 31 to 304 (274 residues), 260.4 bits, E=1.4e-81
• PF00231: ATP-synt
  • amino acids 32 to 304 (273 residues), 259.9 bits, E=2e-81

Best Hits

Swiss-Prot: 50% identical to ATPG_YARLI: ATP synthase subunit gamma, mitochondrial (ATP3) from Yarrowia lipolytica (strain CLIB 122 / E 150)

KEGG orthology group: K02136, F-type H+-transporting ATPase subunit gamma [EC: 3.6.3.14] (inferred from 54% identity to cnb:CNBE0690)

Predicted SEED Role

"ATP synthase gamma chain (EC 3.6.3.14)" in subsystem F0F1-type ATP synthase (EC 3.6.3.14)

KEGG Metabolic Maps

• Oxidative phosphorylation
• Photosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.14

Use Curated BLAST to search for 3.6.3.14

Protein Sequence (304 amino acids)

>mRNA_3590 K02136 ATPeF1G, ATP5C1, ATP3 F-type H+-transporting ATPase subunit gamma (Rhodosporidium toruloides IFO0880)
MLLSTSRTAVRAVAAAPSAARAFSSTPAPQATLRELESRIKSVGNIGKITKSMKMVAASR
LARAQRSMTDAKAYGKANDAVFEQSEASKSEAKVEKILYIVASSDRGLCGGIHSSVAKAA
RKDIEKGEGAGKEIRVVALGEKPKQQMARGEGAKALELSFSQIGKSVPTFNDALAIADKI
EAEKFDFDKVKIIYNKFLSVISYEASALEIYSTKALQGSPAFAAYEVDSDELAGDLSSFA
LANAIYAGLVEGYAAEISARRNAMENASKNADEMTGKLQMQFNRMRQAAITNELVDIITG
ASAL