Protein Info for mRNA_3743 in Rhodosporidium toruloides IFO0880

Name: 12111
Annotation: K15289 SLC35F5 solute carrier family 35, member F5

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 435 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 34 to 52 (19 residues), see Phobius details amino acids 132 to 151 (20 residues), see Phobius details amino acids 155 to 155 (1 residues), see Phobius details amino acids 161 to 179 (19 residues), see Phobius details amino acids 186 to 205 (20 residues), see Phobius details amino acids 237 to 256 (20 residues), see Phobius details amino acids 268 to 287 (20 residues), see Phobius details amino acids 305 to 325 (21 residues), see Phobius details amino acids 334 to 354 (21 residues), see Phobius details amino acids 361 to 382 (22 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (435 amino acids)

>mRNA_3743 K15289 SLC35F5 solute carrier family 35, member F5 (Rhodosporidium toruloides IFO0880)
MARSAAMLVLVVLMWTSASFLMNIMFTDMDYDKPFLVTWLCTASFSLYLVRPAWKYWRTH
QVPHGHATLAFPPHSLSRTTSKNSVDGILRPPLSRRRDTNRSLSRPRPSRNDMGRYLPVL
PVDPPLTTRETALLAFLFCGLWFCANWALNAALGFTTVSSTTILSSMSGFFTLAAGACAG
VESFSVGKIMAVVLSITGVTIVSLGDSKMPTSPPVTPPPASDSIGAFNAPTPSNPLLGDA
LALLSALAYAAYVLLLKVRIRNEARISMTLFFGFVGVFNILLIWPVGVFLDRIGVEEFEF
PHGKMLWASLLINAGITFVSDALYLRAMLLTSPLAVTLGLSLTIPLALAGDILYRRSGEP
VSLASLLGGLLVLGSFVANGVLDLKEAERQSEELVEELEGAEERGLGIEPERERLLGVEE
EDRLPLLPGPSRRLD