Protein Info for mRNA_3837 in Rhodosporidium toruloides IFO0880

Name: 12205
Annotation: K01044 CES1 carboxylesterase 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 581 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF00135: COesterase" amino acids 41 to 551 (511 residues), 256.1 bits, see alignment E=8.1e-80 PF07859: Abhydrolase_3" amino acids 141 to 240 (100 residues), 30.1 bits, see alignment E=4.6e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (581 amino acids)

>mRNA_3837 K01044 CES1 carboxylesterase 1 (Rhodosporidium toruloides IFO0880)
MTIRRFFTSFALLGLLAGSCNAAVIARDATKTLSTPRGSVQAYSSNGVDRYTVPYAVPPV
GTNRFQDPVDVGSFASSISLALSPRSCHAPRSLSLDASKLPPVCAQLDATGQVTGSEDCL
YVTIYTPSTATPLSKLPVLTWVHGGSFMSGGTADLDPSAFAKSQNAVVVLVQYRLGALGW
LKYDKYGFTGNYGLKDVILALEFIQSDIAAYGGDPSTVTLAGQSSGAEIVKSLLVTPSAS
NLFRRAIMHSAPLDYNDQTVKTANGVGAAFVDRFAQCRGWVCARSASLNSILKWQGELVQ
QAQLGNLSVPGIAMAEPLKTCIDGSLVTRDFRQAVQSGGQLENPSRELIFTTTKDEACLT
IYQVFGLYFGAGPYPQTLDDPSVQGMLKMFYGSRAAAINQSGLWDASLLAGDDDAVRKQL
VRLGTDFVWTCPNTISARSLSNAGKVFLAESVPFRMGIDPSSLTLDLRRFDIGVPFNGAS
TPPLCKDRVGHQDDLPLLFRIPSSSARLTFVQQTAQLELFTRWSAFMRNGDPNASGYAAW
PLVGGEAGQEKVFVFGGADGKSKGAVQTAPRKDECAVYTFA