Protein Info for mRNA_3890 in Rhodosporidium toruloides IFO0880

Name: 12258
Annotation: HMMPfam-Pal1 cell morphology protein-PF08316

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Protein Families and Features

1 50 100 150 200 250 300 350 400 473 PF08316: Pal1" amino acids 137 to 181 (45 residues), 33.8 bits, see alignment 2.7e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (473 amino acids)

>mRNA_3890 HMMPfam-Pal1 cell morphology protein-PF08316 (Rhodosporidium toruloides IFO0880)
MTALAMSTNFSRPDAYSRRDPFSDASTSPSHSRQAPPPLDTSFVRSGTVDDILGAYGDSP
TKARQPPLPERLDSSYTTSSSVSASTSRDEIAEMVPVLDRRDDVATATNGALRSSQRSAR
SRPGGPQTRSRSNTDLDLIDRLDISGLYGGGGLMRHEGPYAAASTSRNQGNHAPIAAFDP
SAFSLGPSPSRTPPPPSASSMRRKVSNGLSERAQATLAAMDENRDITLGYPGGRKGSAKN
QQLLEIYGMRDAEAWEEYGQARYEPGGSATASRESVVPNGETGETAKRSKEDRMQRTQSI
WDIEATLKAGKPVGATAPPPIPVIPADWNAPDVSPSNKPKRSKSLAARFRAGRKNPNNPL
TDDTTVVACAEDGREAAQAHSVSVSPVEERRPYRDWPASSPMSLNGSRGPSTGMDGGVEQ
LEARTAAIKFDENGLSAPMSRTTTDDGSVTASPTTGKKEKGGLKRLFSTKRKG