Protein Info for mRNA_3909 in Rhodosporidium toruloides IFO0880

Name: 12277
Annotation: K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 390 PF02182: SAD_SRA" amino acids 130 to 293 (164 residues), 136.9 bits, see alignment E=2.6e-44

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (390 amino acids)

>mRNA_3909 K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1 (Rhodosporidium toruloides IFO0880)
MSFDFQAEKANASLLTGLDVRSLKAVAAEYTPEPSPKKPATPRKPREKAAPILSKDVEGQ
IAEREARGLRSSSRVRDKMMGVTPDKKERHEQLDSGDEEKEYYEGGRKIKTQAAYVPNRL
GKRTETPKKYGPIRGIPVGTLFQSRMDASTASVHGPVVAGIATGPGPAGKRSVASICASG
GYVGDIDMGDRLTFSGSGGRNLTGTKDQPKNLRTAPQSADMRWDENERNQALLYSVTSGK
PIRLMRGFKNQSAWAPVEGYRYDGLYQAVKAWEDISPEGFKICRVALVRLPGQPPLPVHP
QRAHLVDANDAAADDPNFSTSAALSRTTSASSSSAEESVETDLTTPEVEKSEEEASEGRK
VVEEAATSKKREAEEEAQDTPKRRRTLCVA