Protein Info for mRNA_3920 in Rhodosporidium toruloides IFO0880

Name: 12288
Annotation: K12767 RIM15 serine/threonine-protein kinase RIM15

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2800 2904 PF07714: Pkinase_Tyr" amino acids 2064 to 2211 (148 residues), 74.9 bits, see alignment 9.9e-25 PF00069: Pkinase" amino acids 2064 to 2211 (148 residues), 141.3 bits, see alignment 6e-45 amino acids 2317 to 2421 (105 residues), 63.8 bits, see alignment (E = 2.5e-21) PF00072: Response_reg" amino acids 2761 to 2866 (106 residues), 37.1 bits, see alignment (E = 4.7e-13)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2904 amino acids)

>mRNA_3920 K12767 RIM15 serine/threonine-protein kinase RIM15 (Rhodosporidium toruloides IFO0880)
MSQSDSPPSRQTTPLSRRTSAGSSTSGTSSNSPPQGSRVAQPAPPLFTSRTGPQGSPARR
SAFPASSSPLSSGSSAARSRRRQDSISSSVSNITDPTSYEESGEECMGSDGGDKEAASPP
NGALAAGSGGSGLAQARRTGGSASLSVQDLMATVPASSSGASSSAPSVSIPSSSTFPIPI
ATSIPPSSVRLSTTPLFPSPLAQASAPHDDHSRGEDGDSEGEDEEEEDDPVDWAEKMQPR
RPSSRGAAVFGDLELSPPPGGIDLPESSPVASASSEATPRPAVRTRHRQMGGETRDSSPE
IDSSRSARSPRVRSVGRASGLSAVLNASPTSEVSPTKRKSRDSGSLAGLGVDIRGAGSPP
SRSGSMSGSFVSSASPPSPTSSLSISPSSVSRRASLALVSPPRPFQPGSPTTSRLARTSA
APSGSIISVPLPFPAAPPPSESIKLQKVPESVRSALEFRQPASFSGEPMSLPNIHGFGPS
TSPTNVRVPKTPLATRAPSPASSPSSRSSRNSPNTSRTPSRLPSRQSSSEKLQGVSISPP
PERSTPSMASSAFAPLFPFTTSAASPAIGSTRTRDRSRSISVSTEQAALGTPWPRSAVEG
KTAQFPTKDLPVSPPTDLLTPFEGSRRKPTHTPSASISSIGGLSPSSRLATHRTSIAPAG
VGVGNDSTDEYAQIILSTRNAKVRKWKTSGTSVSTLEAGTVGAGKTWTNLGETSEEAVEA
TADGQAVANYEVQPETKEIEWVDWLDEYRKMKEAKLKADEAGDGDSDEEAIEEDEQGEKA
EEAGETRAAAEKGKAVQTRVTTPSPPRREDYKPAEPALTAAQKGKAKATTTDFNSFEAAT
TPKSSVVTTGFLTPSVPLSQQSYFPLAAHVGGASSAGASFQPITTATPMTIADPFDFAPL
RKTISTAGSTASGLGSSPGGKRRRNFAKLGNKIDAWWSAVRTSFATTPDERTRHRRTSTD
HPALSKMSTIEPMASRTSSQFTRPTSPPGSARLRNVASAQDLSRSFAPQIPPHMTNPFHD
RVPAGALAPGARIDSSRRNKSPGSGRSGEESDSNATSRTRRNPHLSLNLGPSFNQMLPPR
VSPRSSPSPRSTPGERPSATDRQQPAKPSTAAQPAAATPLSPPDEPSLTPGHSPMWDRTP
GLVPMSSHFPIRERKVSTATTSRPKVLKDGKGSSSFSMQTVQQQIRQRLSSAKENCDKEL
RRIIAGITNYVENDLHKDVGTPLPPAPADVGARFGQLATEEGGSGRGYGSPAEFEDSGGE
AVMDVDDEPVEELAYTDSDGAGTCIPPSRLKTPHISTDTPTNDGRRRSLVPRTRSKSPRR
ASLAARQRRLTSVPRDAGSLGERKTRSASGSNASSRSNSQSRSHSPMPPGRRHVSGSRSP
GHSSLGHQPSSHTNLAESAFIVLLQEIITVATEILDTPIAKLTSKPGSCAEYIARVQQIG
EAWNDNPELPCRGWYVQLLLAVAGLSRVVEWWEAEKGFWSFEDGADDNGEPILFVAKPTV
EDSPEVRARGESLSSVRTSSLQSPQPKWSPLGIDLGDRADAMSEAGGRTREVSTAVGEDD
SQQRVEDLHEAVETIRSQTLLMELSLDGQLFQYLSSAWQDLVGIEPEECLDTPISDFLYP
DDAAVFAEATRQLEADDSHTVEVSFRLRVASASQTSQDDSPPEDLYEAMEGKGMLMLDGL
TGSPSHTMWVVRPAPYSEAVDQSNQSLGRYGLDGVHWRSTSDPSFFLSPGRLNLEPILCR
ICERPTPAWFFEKHNETCNEVHRLEGDISECNDRLKELLRTVDELVAHLDHRREQGAGDS
SENGDGDEDDDDVVEYRGIPLALSPAATPPTYLEGLRPPLDARHSPSPPQQVRRSQQRVF
EHVREITQIALSISTPSVSDETGEIPIQEQRLLSPNSENNLAAVMRWQRPSTEEAAMTRL
VSDTEEQIRFKLNSVNRLRNTILYAEKVRQEWEIKAREAIEALHATGTTQTRQPSPLPFD
SPQLQPLQFDDDSPRHLDALDLHRPTQNLGRQGSQPLSLLSPNLVPDDGSGLSSSPSANL
ALSPRIPAVVPSSRTKPSSIKDFKVIKPISKGAFGSVYLAKKITTGDYYAIKVLKKSDMV
AKNQVTNVKAERMILMTQTDSEFVVKLYYTFQSKDYLYLVMEYLNGGDCAALVKNLGGLP
EDWAKRYVAEVVVGLDHLHSSGIIHRDLKPDNLLIDSKGHLKLTDFGLSRIGLLGRQTQL
PSARDRRPPIYGRSSSGALSNASSPLQTPALSAQSPAGYFGNVPITDSFSLDTPSESSGS
SLPPSSHARAVSIRSPQVSASRPVGVVGPPGAAAETPNKHFVGTPDYLAPESILGVGMDA
CVDWWALGVISYEFLYGFPPFHDETPEKVFENILSRRFEWHEDAIEISPEAHDFIDKLLA
PDPARRLGTKGAAEVKAHPFLADIDWDNLLKQPVDFVPKVTDPESTDYFDPRGATEQEFK
EEDGAEDPAVANDPAVAQMQQEPPTPFRPPNFGDAARTPRERAGTAPVRRETDDFGTFNF
RNLTVLKQANDDVIRKLKDEQLLPPSSGLPLSSLKTSARSRGGSIDIRAGGFAPSSPSSA
SISSSNSGLLRGQPSSSPFGGPTRSREPSESADIKMSVSVSPGTERFRARQPSFGSVGGR
PGGLHQRRNSLPSRFRKVSVSEPMSESERSALPQDWAIGSGRRRVSVAQSPAPSTLSSPL
SAIEPLPPLSIPEPQYEDIESHSAPPVPAPIDTALRASPSPASAGPASSRLATIDCLVAG
RNPIVTKVLETMLQRLGCRVVVVPNGAEAILAAGGIPFDVLFLDLAMPVVDGEKAARMIK
STVNPSTNAPIVAVCSQPAAIDDAVGTLFAATLSKPIMKADLLAVLAHLGFKVEVKQNEE
RRSSDGNVSVGSSTRTNEERRGSA