Protein Info for mRNA_4074 in Rhodosporidium toruloides IFO0880

Name: 12442
Annotation: KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1062 PF05193: Peptidase_M16_C" amino acids 213 to 396 (184 residues), 35.8 bits, see alignment E=8.6e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1062 amino acids)

>mRNA_4074 KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily (Rhodosporidium toruloides IFO0880)
MDIDPSPSSPNSGIDIPKAAGDFKLVVEDSLEFAPEIQIAKWQSESTGLKVVWASNESPL
VQGYASIVSEIFDDSGRPHTLEHLIFLGSEKYPYKGILDTIANRSFAAGTNAWTATTDTT
YTVATAGEEGFLSILPVYFDHILYPTITDAGFVTEVYHINGKGEDGGVVFSEMSGRENGS
SDLMHLRQQRALFTKENALRSETGGLMEALRRLKVEEIRDFHAQRYVPQNITLIVTGRSL
NPTNLLNTLTEKVLPSIVAHGQAKGRKPAGWVRPFVESTTASNPPKLTEDRTEMVEFPEK
TEDVGELMLSWIGVPHDDFLNDLALEVIGLYLTDSAVSPLSKEFIEVDEPSCTDVTFYAS
SENPSIITSYLSSVPVAELETLPGRFRKALASAVDEIDMDRMKTVLERQKLQVLESMETD
ASDTITNVVVSDGIWGRADGSDLKSSLKVNTLYKVLDGWSAKQWGEVLKKFMVDAPALTI
IGKPSAALADKIKADAKAIIEANKAKFGEKGLAELQKKIEEAQAENDKPVPPEIIRQFPV
PDVNGIEWIKVESARSGGVASAADKPKNRVQEHIDADGAQLPLFVQYDHINSAFIQIGIV
LFPQNVPGFDPAELRALLPVYLDSFFTLPVTRADGTKLDFEEVVKQLDAETLSYSININS
PLQEAVTLRLKVSKDKYTTAIAWLSDLLYNSSFSAERLKISATKALQGIPSEKRDGSEVS
YAAYRKMISEEVSTNVALNLLNREQFLPAFLERLKAEPEAVVKQFEAFRQGLTDPRAIRV
QVKGDILSLPKPSSAWLEQFKPIQPFPEQLAPVKLSKEVMGPLGRQPAKKVVLFGVSSIE
SCFAYHVAKGPDSWTHPDQPALTVARAVLNAMESFLWKFIRGAGLAYGASISQDLESGLI
YYRVYKSPDSHAAFVAARNLIEQLVSGKLEIDDLTIESAKSSLAYNTASKESTINAAANA
SFTNMLLGLPPNYGRIALAATKDITAEDILRVIKKWIAPIFAADSSIASIASGLAKMDEL
AANFEKLGYEVERRTFEDTGDESGSESGSYTGSESGSEDESE