Protein Info for mRNA_4269 in Rhodosporidium toruloides IFO0880

Name: 12637
Annotation: K15634 gpmB probable phosphoglycerate mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 226 PF00300: His_Phos_1" amino acids 20 to 159 (140 residues), 104 bits, see alignment E=4.5e-34

Best Hits

Predicted SEED Role

"putative phosphoglycerate mutase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (226 amino acids)

>mRNA_4269 K15634 gpmB probable phosphoglycerate mutase (Rhodosporidium toruloides IFO0880)
MSPSASSSAASKKPRLPRVFVVRHGETEWSISGQHTGRTDLPLTPNGENIIRALGKRIVG
AGKILDPSHIQHVFVSPRSRAQKTFELLFESVKQEERPSYELEEGVREWEYGVCEGKKTA
EIRETVKPDWDIWTDGCPEGESADQMRDRCDAMIRKIVDMAECVFPFLALKVDELTRMRL
GWVCSAHHGKEETEGHHGDILIVSHGHFSRCFMFVPSLPSLLPLPN