Protein Info for mRNA_4594 in Rhodosporidium toruloides IFO0880

Name: 12962
Annotation: K19589 N6AMT1 release factor glutamine methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 223 TIGR00537: putative methylase" amino acids 18 to 212 (195 residues), 93.4 bits, see alignment E=6.8e-31 PF05175: MTS" amino acids 26 to 129 (104 residues), 27.4 bits, see alignment E=1.1e-10

Best Hits

Swiss-Prot: 51% identical to N6MT1_MOUSE: Methyltransferase N6AMT1 (N6amt1) from Mus musculus

KEGG orthology group: None (inferred from 52% identity to cfa:487715)

MetaCyc: 51% identical to methyltransferase N6AMT1 (Homo sapiens)
2.1.1.-

Predicted SEED Role

No annotation

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (223 amino acids)

>mRNA_4594 K19589 N6AMT1 release factor glutamine methyltransferase (Rhodosporidium toruloides IFO0880)
MIPTPITSHLSAADFETVYEPAEDTFILLDALEQDAELLKGSRVCLEIGSGSGCVSAFLG
AICGSSSALYLTTDLNPHACRCTLLTSTRNSVPLNPILTDLTSALLPRLTHQVDILVFNP
PYVETEDEEVVEAQKEDGKRIEKSWAGGAGGMRVTNRLLEQVDTLLSDRGLFYLVAVPEN
KPLAIIADMQARGLEGEVVLKRRAGREHLHVLRFSRPGRTAPP