Protein Info for mRNA_4714 in Rhodosporidium toruloides IFO0880

Name: 13082
Annotation: K01183 E3.2.1.14 chitinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00704: Glyco_hydro_18
  • amino acids 73 to 420 (348 residues), 253.8 bits, E=1.7e-79

Predicted SEED Role

"Chitinase (EC 3.2.1.14)" in subsystem Chitin and N-acetylglucosamine utilization (EC 3.2.1.14)

MetaCyc Pathways

• chitin degradation II (Vibrio) (3/5 steps found)
• chitin degradation III (Serratia) (3/7 steps found)
• chitin degradation I (archaea) (1/7 steps found)

KEGG Metabolic Maps

• Aminosugars metabolism
• Nucleotide sugars metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.14

Use Curated BLAST to search for 3.2.1.14

Protein Sequence (466 amino acids)

>mRNA_4714 K01183 E3.2.1.14 chitinase (Rhodosporidium toruloides IFO0880)
MLKGVQTEPQKPVIHRRTSPILAVAVLALLLLLISPTPFTRLSRLAISPWHSRDTSSTSI
TMSSVPRPQGKVNVGYFPNWAIYARNYKPDSIPVEDLTHLLYCFADVKEDGEVRLTDAWS
DEQIHYAGDSWDDGGAANLYGNLKAIYLLKQRNRHLKVLLSIGGWTYSENGRFARPVSTP
QGRSRFVETAVKLVEDYGLDGLDIDWEYPQNDGEAKDYVDLLRMLRGGLDELQRKLGVQP
PSGFELTIAAPCGPSNFEKLRVREMDQYLSFWNLMAYDYAGSWDSQANHQANLFHPDPNA
LSTDRAMRFFTDPNKGGVKPEKLVLGIPLYGRSFLNTQGPGTPFSGVGQGSWEAGSYDYK
VLPLPGAEEAFDQSLVTASCYNPSTREWISYDSVSSAQAKAIFTCVNGLGGAMYWELSGD
RKPQEGGSIVRTVREVLETQGGGLDKRENWLHYPTSKWENLRKGMQ