Protein Info for mRNA_4767 in Rhodosporidium toruloides IFO0880

Name: 13135
Annotation: KOG1263 Multicopper oxidases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 492 PF00394: Cu-oxidase" amino acids 30 to 172 (143 residues), 75.3 bits, see alignment E=6.3e-25 PF07731: Cu-oxidase_2" amino acids 298 to 403 (106 residues), 90 bits, see alignment E=1.2e-29

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (492 amino acids)

>mRNA_4767 KOG1263 Multicopper oxidases (Rhodosporidium toruloides IFO0880)
MKNQQVCPPSPRPLLDSTFPDFPSSSASQIIFINDWYHDTTDTIVNSLLSSQGYNSSFVA
PSPQSGLVNGAAIYNCRFAEPGLTGEQKAQRDMPELRFPPDARVRLRFVNAGAHPVNWVS
VDEHELYIIEADNTPTLPVPVHRISVNVAHRYSGVLLTSGRRIGDSFYLRAQINTACFGA
GFPDLDPQTPLIFRIADEGHRLAKTLPRSRDWNDPTTGNCTDLDETVVVQHAPPQAEQIS
VFNSSRIGPLTTTDEAGLSDGISFLEWTLNNITYENFAYTPLLHQIVRGEDPNTGRIALI
TAWNVETVDIVIQNLNGPEHPFHLHGKPFWIMARSQGSVGPETIASLDLNTYNPLLRDTL
GLPSGEWVLIGLVADVPGVHAFHCHIVFHQAQGLFGALMIQPDVIRKLQDPGGELPGALA
LLCAQGNPNVIDPGRRGRLRKRLFDLPHLDLLHRHSKTSTTTSPQPTHTVVHAQQHDKLH
DATIRSGVGECS