Protein Info for mRNA_4783 in Rhodosporidium toruloides IFO0880

Name: 13151
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 849 transmembrane" amino acids 97 to 121 (25 residues), see Phobius details amino acids 141 to 158 (18 residues), see Phobius details amino acids 174 to 195 (22 residues), see Phobius details amino acids 214 to 241 (28 residues), see Phobius details amino acids 260 to 280 (21 residues), see Phobius details amino acids 301 to 323 (23 residues), see Phobius details amino acids 335 to 353 (19 residues), see Phobius details amino acids 404 to 424 (21 residues), see Phobius details amino acids 494 to 515 (22 residues), see Phobius details amino acids 530 to 549 (20 residues), see Phobius details amino acids 569 to 590 (22 residues), see Phobius details amino acids 598 to 624 (27 residues), see Phobius details amino acids 644 to 663 (20 residues), see Phobius details amino acids 684 to 705 (22 residues), see Phobius details amino acids 717 to 736 (20 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (849 amino acids)

>mRNA_4783 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MPSPAPRPQQETRTQGRGLSRGRGDPRGWRLQAIEARAIDAILARDGGGHHLPLWDYEAR
FFSSCFDARHCSARTTALTNPAMAPVDLVRRSEQREIIALLLPQGIGSQVSLLLFGVYIV
LHWNYVTSELYPRLSTSVKATLWAVFLFTTAYELVQAADTLYWLVTVNHTVEHIFNGVAL
DSVIPLVAAFVAVPVQCRLAIRAGALLRTRWIRWAFWSVVGVGIVTGFAGAVLMCATFLM
YVVGTIENIAPLSYNNTVSIWLWASAFVDLAISVCLTITLSRRIQGFNDSTDSLLRKLIK
VSLKTAAYTTLLAVGGAIVASAINDNDVNSAYAHFAFWFPLPPCYALSLYTTLTTRKTVQ
QHLSRAYAAAADPNSHRTSIPPRVALDLSALNSARSAQRSHDAVVSSGYFSGPAAAFPAF
RLAISLLEPRRRTPRQRTHAATCAERRTANGMAWTAEQAFGRLCSFGNIGWTIWNDLSVR
LRCPRLAAHQTAALLAPQFVGSGLSLVLYGVYIVLQYQYARGDLYRRLSWPVKATLVLVC
FLVTGYEIVQYGDTMYWSLTVKRTPDDIFNGVPLDSVIPLLGAVVAAPLLRQRWTRNLFL
LVGGILVLAAFTGAILTCATGIMYFNDTIDNILPFTYNDAVSLWLWSAAACDVAISLCLA
FTLHRRIQGFNANTDTLLKKLIQTALRTAAYTAVLAVGGAAVASATPDSDYNSSFAHFAF
WFPLPPCYALSLFTTLSARRTITAHLAPSPSTSPASPRLVAPPAAAHQRATIDYSGLRAL
EGEEGPEVREEFGPDESTKREKEETVSRWREEQKKWTLSLEKAAAPHPDEDDELEEWEGR
GRANRRGVV