Protein Info for mRNA_4922 in Rhodosporidium toruloides IFO0880

Name: 13290
Annotation: K18670 YAK1 dual specificity protein kinase YAK1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1353 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details transmembrane" amino acids 755 to 770 (16 residues), see Phobius details PF00069: Pkinase" amino acids 573 to 901 (329 residues), 174.3 bits, see alignment E=3.4e-55 PF07714: Pkinase_Tyr" amino acids 574 to 782 (209 residues), 77 bits, see alignment E=1.5e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1353 amino acids)

>mRNA_4922 K18670 YAK1 dual specificity protein kinase YAK1 (Rhodosporidium toruloides IFO0880)
MRPISSLFFPSTPSHANPNSSDPLLIPLAHDTSNSAHTDWVTVPIHAGTHTDSHSHPSQP
PAGSLPLATHNPPPPSSSQHSRSLSLSRYARAGHDSYDSLSTSPSTHSSFRSSTLLEQGL
PPPPSFVDHLASQQQGHRQTRSVGRVPSISSVSSHASSSHAHSSTTAANPHPPPPPPPQT
SAAHRSRNPSFSTPARQPSMLASGAGTNSVPQQRQRAPSNSSRSMVYSPLPPQTATSDSG
AGAGGQFIRLSPGAASMASGSGGSGGSSTVPGGQADAASAGAAMRRGFSCDGGSGVSSSA
GGGLLPGSYASSSSGGRALYSPMTGVQSTGPPSSSASTSASSPSRQAMLPTAPSPSRAYS
PSHYAASPASASSFVPPHHAPPPPNASSFYPQHIAQSYPFAGQSTSPNPLSPGSASSAGH
PHLHGHSHSFSGTPSTSSSSHAQGHDIRHLSLSRPAPAPAQTQQRKKKGMVRVREGEEVE
RAGTTRGGQPRGRRADPAGGFVSPLKALTVSLSETYHLVNPSFTYETSRNPRRVLTKPSK
PAQNDGFDNEDSDYILYVNDVLGPEDKDRYLILDVLGQGTFGQVVKCQNMKTHEIVAVKV
VKNKPAYFQQSMMEVTILELINNQWDKDDEHHMLRLKDTFIHHSHLCLVFELLSNNLYEL
IKQNSFRGLSTSLVRVFTAQLLDALSVLNEAKIIHCDLKPENILLKSLQSPTIKVIDFGS
ACHEKQTVYTYIQSRFYRSPEVILSLPYSSMIDMWSLGCICVELFLGLPLFPGTSEFNQI
TRIVEMLGLPPDHMLDKGKQTSHFFESFSDEYGRRRWRLKSLERYAQEYKANEQPSKKYF
SASTLPEIVKQYPIVRKGLKEADIDKEMRNRIAFIDFVQGLLHLDPEQRWTPQQARLHPF
VLGEPLLAPFVPPPRHLVAKGGAPSPTEVAAAKQQQQVQAAAAAQAQAQAQARQQPYGGM
QPGARQVQQARPYLPQQQPQPPGYGLQPQQQPQQRPQAGSSAYSMPAEAQAQQAAAQAYA
QAQARSLYGAAAGGFAPRTAPAGGAGPTPSTVANPPAVHHQYGAGRQRSGTHGAHDAALP
PALQKLGYELGAGLGAGQSITPVLRRDDQWQAWEQQYGPGATGLSRRISVSGRHPHLNLL
QEQAEAGFHSWNSPARAKPQQQQPQQSPYAPAAGGGYYASPHQPSTSQFSVVVDPAQDKQ
RPGSDLFDPVGGIAPPPLAYVGGNSAARYAPYPSAAAGGSGAPLPPSGAAMPLSTSIDHH
HPASHHHSPIVPPSFDAFGTPISSATQPNPLMHGHDPLSHYQPLQPYASPNLSRTAQQGA
GPGPPQPGQQRAMYSPGGAYGGQPGGKPPRGLW