Protein Info for mRNA_5001 in Rhodosporidium toruloides IFO0880
Name: 13369
Annotation: K00649 GNPAT glyceronephosphate O-acyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.3.1.15)
MetaCyc Pathways
- CDP-diacylglycerol biosynthesis I (4/4 steps found)
- CDP-diacylglycerol biosynthesis II (4/4 steps found)
- phosphatidylglycerol biosynthesis I (plastidic) (5/6 steps found)
- phosphatidylglycerol biosynthesis II (non-plastidic) (5/6 steps found)
- superpathway of phospholipid biosynthesis I (bacteria) (9/12 steps found)
- oleate biosynthesis III (cyanobacteria) (2/3 steps found)
- phosphatidate biosynthesis (yeast) (3/5 steps found)
- palmitoyl ethanolamide biosynthesis (3/6 steps found)
- superpathway of stearidonate biosynthesis (cyanobacteria) (2/6 steps found)
- anandamide biosynthesis II (3/8 steps found)
- diacylglycerol and triacylglycerol biosynthesis (2/7 steps found)
- stigma estolide biosynthesis (2/7 steps found)
- anandamide biosynthesis I (4/12 steps found)
- superpathway of phospholipid biosynthesis II (plants) (15/28 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.3.1.15
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (850 amino acids)
>mRNA_5001 K00649 GNPAT glyceronephosphate O-acyltransferase (Rhodosporidium toruloides IFO0880) MTAADKRKQRHSASLATLGPDDPEALLGVDFEPRTRPPTVVTTAEPGLVALQPVLVQEEN AVGVVKEEKKRVGNGEQRNLVENHQAHLRADPIEFSKQLSLWASGTGWRSYTDYIGGRVF YPGYSDDCMRGILSSKQVNKRIQEVTEKRLAGLQLPEGPEKEKKRRQIQEELKKEARRLS EGLVAKMDNVRFLRGFGALVNNILVRMYHQGLEISIPEYARFKEVAQMAASKKQSLLILP CHKSHIDYLTISWLFFRLGLSLPHIIAGENLNMPVVGPTLAKCGAVFIRRSFGDDPLYST VVKEYIEQLLENGKNIECFIEGTRSRTGKLLPPKLGILKYVLEALENGRTEDVWVCPISL QYDKVIETESYVNELLGNPKEKETLTGLLLNTRVVQLQLGRIDVRFQKPFSLRGWLDEQK KRRSTSTTSPLGGTGIKNDQSVLLRALGYEVLAGINDCAVIMPAGLVGTVMLTIRGRGVG KSELVSRVVWLKKAIEARGGRVADFGDMSPEEVVERALEFLKYLIGEQTDLIESTYYPIS RFELSFWRNQTIHLFVEEAMLCAVLYTRVKAGGAAPSQRMERAEVLRELHFISRLLSNEF VYPPDGLEANSDKTIVALEDDEVILTEGELIGLNPKERAAGRNNFDFFCFLIWPFIETYW LAAVSLFALAPTSPPPSADEPVAWYAEKAFQASAQLLAKTLFAQGDVSYLEAVNQATLLN AFQRMVDVGVLLTRRSTSNAANASIAKIGKDGKPKLPKKPASVPLMALHPDWVPRRQADG TIVPEGRLWEFVDRLSKFRREGKNRRDNKTVSVRVFAHCSTIAPQVIEYTAFQNDMPTSD FWAEKRQAAL