Protein Info for mRNA_5014 in Rhodosporidium toruloides IFO0880

Name: 13382
Annotation: K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 862 PF09364: XFP_N" amino acids 44 to 428 (385 residues), 425.4 bits, see alignment E=2.5e-131 PF03894: XFP" amino acids 453 to 623 (171 residues), 249.7 bits, see alignment E=2.2e-78 PF09363: XFP_C" amino acids 634 to 856 (223 residues), 220.6 bits, see alignment E=2.3e-69

Best Hits

Predicted SEED Role

"Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) @ Fructose-6-phosphate phosphoketolase (EC 4.1.2.22)" (EC 4.1.2.22, EC 4.1.2.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.2.22 or 4.1.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (862 amino acids)

>mRNA_5014 K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (Rhodosporidium toruloides IFO0880)
MADNADAPPPPIVPSQYAQHPDAPLSSLPVQLDPKQYTAKYPAKHLDAIVANWRLACYLG
VAQIFLQSNALMQRKLTKDDVKPRLLGHFGTGPGLSLAYAHTQALIRRKGEEEGAEPKMI
FVTGPGHGAPAILSPLYIEGAISKFYPQYPLNEQGLEKFVKYFSWPGGFPSHVNAETPGC
IHEGGELGYALGVAYGSVMDRPEQISVVVVGDGESETGPTATAWHSHKWLDPAESGAVLP
ILHVNGFKISERTIPGTMDNIELSLLYSGYGYQVRFVEYKAQGEAHMGGNDPADRVLHED
MAASLDWAYTEIRKIQKAARSGGKPIDKPRWPMIILRSPKGWTGPSSEHGKQLLNNFASH
QVPLPDAKTDDEANAYLERWLKSYEADKLFDFSEDNLKRGTIFDQLLYEALPKDMERRLG
FVKETYNAYKPLELDDWKKYGYKKGEDVSCMKAIAGYLTDVIKRNPKDFRIFSPDELASN
KLDGVFSVTERNMQWDPETAHKGGRVTEMLSEHSLQAWLQGYTLTGRHGVFPSYEAFLGI
VATMTVQYTKFMKMALETNWRGPTASLTYIETSTWTRQEHNGYSHQNPGFVSTVLSLPSQ
LARVYFPSDANTSVSVIAHCLRSKNYINLIVGTKAPTPVYLSVEEAERHCIAGASVWENY
SVDKGVDPDVVLVGIGYELTEEVVHAAALLRKDFGTDLRVRVVNVVDLLVLAPKGDHPHA
LDEAGFNSLFPPGVPIIFNYHGYAGQLASLLFDRKHSVGRSRMRIFAYSEQGTTTTPFAM
MCCNNTDRFNLAAEALEMVTLNLTTQHNITGDEKRHRVGSVVARAHERMSFYKHKKVVMM
RYAAETQKDHPEIGEVATLAEQ