Protein Info for mRNA_5045 in Rhodosporidium toruloides IFO0880

Name: 13413
Annotation: K01111 E3.1.3.68 2-deoxyglucose-6-phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 262 PF00702: Hydrolase" amino acids 9 to 203 (195 residues), 46.1 bits, see alignment E=7.7e-16 PF13419: HAD_2" amino acids 10 to 209 (200 residues), 78.9 bits, see alignment E=5.3e-26 TIGR01509: HAD hydrolase, family IA, variant 3" amino acids 98 to 209 (112 residues), 33.6 bits, see alignment E=2.1e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (262 amino acids)

>mRNA_5045 K01111 E3.1.3.68 2-deoxyglucose-6-phosphatase (Rhodosporidium toruloides IFO0880)
MPVEITVQGLLFDMDGTLVDSTPAVEKTMGDWCHEQGIEPSEFFQHSHGVRTQDNIKRFQ
RIPVPGTSLSEEELVDSVNKLEWLIAENGRLMHEAGGKGIERLPGAKELLDALRAGGARW
GICTSATRTYASSALKTGEIGAEPPALPFLVTANDVTHGKPHPEPYLKGLDELRKLPGAA
FEPSDILVVEDAPSGLKSGLAAGCKTLGVATGQPLERFRTFEATVKTMDLTRVEVVSASP
DAVTLRIKTLEEEEPEKTNGTA