Protein Info for mRNA_5072 in Rhodosporidium toruloides IFO0880

Name: 13440
Annotation: K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 354 PF00503: G-alpha" amino acids 15 to 343 (329 residues), 406.1 bits, see alignment E=2.2e-125 PF00025: Arf" amino acids 178 to 275 (98 residues), 43.8 bits, see alignment E=3e-15

Best Hits

Swiss-Prot: 74% identical to GPA1_EMENI: Guanine nucleotide-binding protein subunit alpha (fadA) from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)

KEGG orthology group: K04640, guanine nucleotide binding protein (G protein), alpha, other (inferred from 74% identity to ani:AN0651.2)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (354 amino acids)

>mRNA_5072 K04534 GNAO, G-ALPHA-O guanine nucleotide-binding protein G(o) subunit alpha (Rhodosporidium toruloides IFO0880)
MGCGGSKPVDQEGKARSDEIENQLRKDRMAMRNEIKMLLLGAGESGKSTILKQMKLIHEG
SYTDKERENYKEIIYSNTVQSMHVILDAMEMMGIQLANPEGQRYQEVIMSQPHQIEADFL
PNDVTEAIIELWKDPGVRECFSRSREYQLNDSAQYYFDSITRIGSRNYIPSDQDVLRSRV
KTTGITETTFQIGELKYRMFDVGGQRSERKKWIHCFENVTAILFLVAISEYDQMLYEDEA
INRMQEALVLFDSICNSRWFVRTSIILFLNKIDLFREKLPRSPIANYFPDYTGGSDLQAA
CDYFSSRFVSLNQSTAKQIYVHFTCATDTSQIRFVLSAVNDIIIQINLRDCGLL