Protein Info for mRNA_5075 in Rhodosporidium toruloides IFO0880
Name: 13443
Annotation: K00958 sat, met3 sulfate adenylyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 70% identical to MET3_USTMA: Sulfate adenylyltransferase (MET3) from Ustilago maydis (strain 521 / FGSC 9021)
KEGG orthology group: K00958, sulfate adenylyltransferase [EC: 2.7.7.4] (inferred from 71% identity to lbc:LACBIDRAFT_183631)Predicted SEED Role
"Sulfate adenylyltransferase (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25)" in subsystem Cysteine Biosynthesis or O-Methyl Phosphoramidate Capsule Modification in Campylobacter (EC 2.7.1.25, EC 2.7.7.4)
MetaCyc Pathways
- superpathway of L-methionine biosynthesis (by sulfhydrylation) (12/12 steps found)
- superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) (9/10 steps found)
- assimilatory sulfate reduction I (4/4 steps found)
- assimilatory sulfate reduction III (3/3 steps found)
- sulfate activation for sulfonation (2/2 steps found)
- superpathway of sulfate assimilation and cysteine biosynthesis (7/9 steps found)
- assimilatory sulfate reduction IV (3/4 steps found)
- sulfite oxidation III (1/2 steps found)
- assimilatory sulfate reduction II (1/3 steps found)
- selenate reduction (2/5 steps found)
- dissimilatory sulfate reduction I (to hydrogen sufide)) (1/4 steps found)
- superpathway of sulfur metabolism (Desulfocapsa sulfoexigens) (1/5 steps found)
- superpathway of thiosulfate metabolism (Desulfovibrio sulfodismutans) (1/5 steps found)
- superpathway of sulfide oxidation (phototrophic sulfur bacteria) (2/11 steps found)
- superpathway of seleno-compound metabolism (5/19 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 2.7.1.25
Use Curated BLAST to search for 2.7.1.25 or 2.7.7.4
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (579 amino acids)
>mRNA_5075 K00958 sat, met3 sulfate adenylyltransferase (Rhodosporidium toruloides IFO0880) MANSPHGGVLKDLHARDAPIRQQLIQESETLPDIRLTERQLCDLELIMNGGFSPLEGFMT KEDYESVVETLRLTDGALFSMPITLDVSKEQIDSLKLTPGSRVTLRDSRDESPLAILSIS SIYQPNKSNEAEKVFGADDQAHPAVHYLHNSVKDFYVGGAVQAINSPEHYDYVELRYTPR ELRAYFEKLSWTRVVAFQTRNPMHRAHRELTVRAARQQRANVLVHPVVGLTKPGDVDHFT RVRVYEAIIRTYPKGMAALALLPLAMRMGGPREAVWHAIIRKNFGATHFIVGRDHAGPGK NSQGKDFYGPYDAQELVTKFKDELQIEMVPFQMMSYIPDQDTYMPVDEIPKGTVTADISG TELRRRLKTGAPIPDWFSYEAVVKVLRESYPPKARQGFTILLTGYVNSGANAIAKALESQ FQQQAGRSVSLLLGDTIRSELSAELGFAPEERHKNLQRLAFVAAELSRAGAAVIATPIAP YDHSRKAAKAHIVQNGGAGGGNFFLVHVATPLEHCEKTDRRGVYAKARSGEIKGFTGIDD KYDAPTDADLVVDLSKQSVSSATHAIILLLESNGLIGSA