Protein Info for mRNA_5077 in Rhodosporidium toruloides IFO0880

Name: 13445
Annotation: KOG1663 O-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 301 PF01596: Methyltransf_3" amino acids 102 to 299 (198 residues), 126.9 bits, see alignment E=6.4e-41 PF13578: Methyltransf_24" amino acids 128 to 234 (107 residues), 34.8 bits, see alignment E=3e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (301 amino acids)

>mRNA_5077 KOG1663 O-methyltransferase (Rhodosporidium toruloides IFO0880)
MPTYVTTHTGGTPTTRTASLLSTTLTHLDPSSPAYSTILDAHSLVSGEEAYIERNTSELI
VPAGHAVPEKEVREAWDELLRKTTETDWKAVKDRGETKFELGAGMCSGPYEAVVLQNFAL
MQQAKTVLEIGVFTGTATLALALLPSVTQVVALDIEPYLSIFNAPYWTRAGVSSKIDFRI
APALESLAKLKQEGHEGFDLVFIDADKPSYREYVEQVLELGLLKKNGVILADNTLYKGYP
WAPPPSTDQSAYAESNRTNNKSKSEATKGIDDFNTYVRDHPDLETAVLPIRDGITIIRRR
V