Protein Info for mRNA_5085 in Rhodosporidium toruloides IFO0880

Name: 13453
Annotation: K03114 SWE1 mitosis inhibitor protein kinase SWE1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1564 PF00069: Pkinase" amino acids 1182 to 1482 (301 residues), 141.3 bits, see alignment E=4.1e-45 PF07714: Pkinase_Tyr" amino acids 1184 to 1342 (159 residues), 63.5 bits, see alignment E=1.9e-21

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1564 amino acids)

>mRNA_5085 K03114 SWE1 mitosis inhibitor protein kinase SWE1 (Rhodosporidium toruloides IFO0880)
MDSLRPSSSPSRSPHTHILRPRRSFQRNPFSSKTNILSSLAGNNGGEKLQSPVKLADASS
GNEGAAGTGKGRGRGGGAMLFPPSPNNPPAVHVSTASSTSTLPSPSAPTPAASSSARSST
RPGQREVAGLKRLASAFGGAVLGKTRSSTALRKAFDLGDWNHDLAAIASHPPSSTPTSPG
PQDVLAARRARPVDPATARGESATSSLSGGDMSSPVNEISPRNTRQRPAYGRAGEEFVAR
LGPESGRRRKSDEMDQDERGSFQLASPAAAAAGASVVPAVRPRESHHIHPHHAHSRTHSL
AHAHTLRSSRMLAYQATGGENSPGPSFASPVSLPRSAPSLNLDNPFVSPPADTFSSGTAP
PPSKRVSIDRLTAFDEADEDSALSGDDAVFGGPSLASNAPRKVGRAKSLSKPSVPSFNVV
AIPSSSSHPGFSTARPHSPNLAPPASPSPTDSLRPTTLPRPRNSGPSNSPALDTLNEAGP
AIDYFSNPGSDLRDGAVSPTGSSGGGAGTGTMTPPRRRGDSHGAFNLFGANAPATGGGVS
AAEKAARRHSMLPQASGFSLHTSFSPTSFDPSSTLSPLKSSTASGSTSMPDMSEASDRPP
PLPRLRPLHTTGARRLSLAPSDAERIGTFEMRPFGTPLQAASRKRNANGALLPGAATSKL
AANSPIINPPSSSPAQPRSRLDDRRSSMAEDEDYAMDEDEGPSRHSMDSWRGTVPALTDA
ATSVSSSSLCTALSGQLEQNDNVAVTASTSTHSLNSTHGAAQPEGTGPDGTFFTPQNYKN
VRPLAAAFMSTGLVSKRSRPRTNSMGGAPVFNLHQHLQQQLGEAVPPKGSPMKAPAGSVQ
GDAFAPIPNPLVASLSRPSMPDTPVKRSAFVHGQSSAVGAGRSSLGSASVATPGVVVEDA
SSSDGCQPSPTTAAMDAGSPVGHSGSLTSNQASLTLDEMSESQESISPLGSAKKHFQRSA
SPLSRGSVSPSSSSTEASGASGSASKMRTGFDSGDMSPTVHASKSASRFVSASMRNSLGR
VRPALFRRRSSGQLSSEGSFCGIQYRSGSSSSSGKSTATNAICEGEPMTPTRSVGEKYWE
GTQLLDTPTEEPPVTPATPAFPNLPPHPFALPNQASIFLQAAQTPHGAPRASYPLSEAEQ
RQRPGPPPPQGRPQFKVRHSSSTVLSLRQQELSQPSKFETNYTLLRNLGNGAFSDAWEVA
DHTREGKVYAVKRTKNPFLGPKDRLRRLEEVDILRLFSTEKDASPHLISLVDAWEQSGHL
FIQTELCPAGNLAYWLEVYGSEHEQLDESRVWKILAELSAGVAHLHSRNVLHLDLKPANV
FITDKGHLKIGDFGLATRWPRADPLSIMKGAAVEGPEWNSLTSEGIWRTEMGERRIRAKS
NGDAPEDLEREGDREYIAPEILSGRYGKEADVFSLGLIILEAAANVVLPDNGPAWQKLRS
NDFSDVDLSRLSPLLGDILRSMLHKSPDLRASIFEVVRHPVLSQLIAMLERSLASESSGS
TPEVLGAVCAEADSFLHDLFNKAYPEQASPAAPAFPLLMQEPPELFVDGLPPQQDSDDER
MDVD