Protein Info for mRNA_5101 in Rhodosporidium toruloides IFO0880

Name: 13469
Annotation: K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 321 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details transmembrane" amino acids 178 to 199 (22 residues), see Phobius details amino acids 206 to 225 (20 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 290 to 309 (20 residues), see Phobius details PF04756: OST3_OST6" amino acids 24 to 318 (295 residues), 320.5 bits, see alignment E=5.6e-100

Best Hits

KEGG orthology group: K12669, oligosaccharyltransferase complex subunit gamma (inferred from 38% identity to pan:PODANSg912)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (321 amino acids)

>mRNA_5101 K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma (Rhodosporidium toruloides IFO0880)
MLASPLLLALLPGLVAAATPQLDKFRALAKRNGGLLSLDAASYDELTSSPRDYSVSVVLT
ALGAQYKCQPCQLLQPEYTLLAKQWSSTKKSSDEEHFFAYLDFQNGPEVFQRLGLQTAPV
FQLFMPTEGPRATGKLAAETVDFGRTGFKAESIASHLSAHANLPSLKFARPVDKTKVLKT
VASVVVGVLAVWRMWPLFVVVFTRRYIWSAICIFTILFMTSGYMWTQIRRPLYVQAERNG
QVSYIAGGYQTQLGAEVHIISAIYGILGFSAYILAYTIPKLTDPVRQRLGVYVWTGVFIV
MSGVLMNIFHMKQPGYPFRIF