Protein Info for mRNA_5142 in Rhodosporidium toruloides IFO0880

Name: 13510
Annotation: K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 286 transmembrane" amino acids 200 to 217 (18 residues), see Phobius details PF00153: Mito_carr" amino acids 94 to 188 (95 residues), 59.6 bits, see alignment E=1.2e-20 amino acids 200 to 277 (78 residues), 59.5 bits, see alignment E=1.3e-20

Best Hits

KEGG orthology group: K13577, solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10 (inferred from 49% identity to afv:AFLA_135930)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (286 amino acids)

>mRNA_5142 K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10 (Rhodosporidium toruloides IFO0880)
MRTSGSPELTIVVPPSPLAFLCSLSLHPPPFLFVPTTPLDPTSHSPPRPAGLRRGAYAGL
SASILRQMTYSLTRFGVYDELKKRLTKRHPVGQPLPAWEMAAAASVAGGLGGLAGNPADV
ILVRMTADAAKPAAERLGYKHCFDGVFRIIREEGAPALFRGVGPNCARAILMSASQLATY
DFYKDMIVSTGLIKDGLPLYFASSFLAGTTATTICAPFDVIKTRIMNASGSASIGSVISH
SFKTEGMSWMFKGWTPAWIRLSPNTIIIFLTLENLKKGVDYIRGTP