Protein Info for mRNA_5166 in Rhodosporidium toruloides IFO0880

Name: 13534
Annotation: KOG0590 Checkpoint kinase and related serine/threonine protein kinases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1571 PF07714: Pkinase_Tyr" amino acids 504 to 758 (255 residues), 37.8 bits, see alignment E=1.4e-13 PF00069: Pkinase" amino acids 633 to 759 (127 residues), 60 bits, see alignment E=2.6e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1571 amino acids)

>mRNA_5166 KOG0590 Checkpoint kinase and related serine/threonine protein kinases (Rhodosporidium toruloides IFO0880)
MNELTGHHSHGNGSGGSGSLSPAGSGSAVGSTSPSPQRKGGSRRSSVQFAPVTPSSPPRV
SSPSSPTIPPTVSLFPPAANAPAPLSTPSLSSPTLSSASLANSTAGAGGAKTHLASFLSG
ITHHTRVRSPGPSGGRGVSRSASRSHSRASSVSGRSRMPSGGSEEVDEEEEGEPWTPGDG
VGEWEDGAQGGTEGREFNWFGTALAGSTTTSGFNGPTGRFRSPSASSRPPPANRARSTSS
RASSIHTRSRRNSLTPSLASSSAAAHPLLHELVRENTTGGVVPTEVVQGGEGKVQQWEAT
YETYKPSVLTTPRFQRTTTGATDEEPFLDSAPNSPRAGAGAGQLVARTKTYDSFVSSSED
GGESAASNDLSAIDVFEEGERIGVGVWLEGRGGYVRDCFAGRADKDGKAPGNGLDGPRQL
EIERRLGEGTYAIVYLVREVLYDPDPTDDDILSPIDPLASFEFDDHHADSDGDSGSTSGR
PRLHSWSSDFYAPPPKPTYGQYYALKCLCKKNLTEDLIEVQRNEAFLHRALPKHENIVQM
YGAYETDDWLFLVLEYAGTEDLYSRAASPAAENSPNGRSSFDFDNPDPDDSSLSRTITAD
TPAHLLVDETPPSPSLLSAAMGDQLLSRKRLRLISRMFGQMCSAVQACHDVGISHRDIKP
ENFIVIDGKGDRGSRAAGLPPSTVTQGPDGKQGVVVKITDWGLGTMEEVCEDFDCGSKPY
MAYECRNNLRPTYDPRQADVWSLGLVFLNLLYHRNPWADPSLDDPDFAEYVEDPIGFLQN
RFEGMSDEVAHYLADNVFCDVLEVVDGKERRRVSAGEFGKWASRLVMMLGEGQLGQQRPQ
IASSDSFSAFEFSPVSTMPLTIPGGGPPTTSLLSQFAPSTVKANQSIFDDFPNELPTVPE
VPGDSSFRSNAPSFPTSSTPSRPAYISSPSAISEDGDSLPSPTFPSPPVPNARLPAGSNT
TSPEGLQRPLPWSTPSITTSPSSLFASPPPSDTATSSPVPASSPLPQPALPVPANAPSGL
SLLAARRPSLLDAQHESALSATSTVVPDSGTTSQVASPEASPGEGRSPTQTNGVEPPSSD
DGTKLGEVDGAVEHGKEGSSEECKDDSEAKAAAEKAHKSKRRKRGARKEKRAAKQAEREK
GGSGAASPVSPIASSRSTKLPTVNESTSTSSRDHVLDDLAAASQELARELSSTRSGSSHR
SSRPRPGPSSRSHGTQSTSAIPTLPQDIPPLPSKKGGMFGRLKTLVNEGNQDLEAFKRRV
EERNASIGANADTTSAPAKMQGARAPRGKYDSPFSSRGSVGTASWGSNWSGNEPAGGADE
SRGRGSAHDHWSSASTRRDRLAGRRGQPAGPGGAAVDFSPSSSSLTRGGPSTLSAFDSAS
RTHTPLSSFGSVGAPLETKSTGTATSTTTATSREWRSPSPSRAAARPYSSSRARESPLPA
LAPALAITGSTPVAAAPRPKLRDAATDTSDLGKLSTSSTSPPPPPLQTSASSPTISTAPA
RPPPQQPTTSPAPSPTPAPATLPNAAGGGGGKTNKLAKMLNSISVFNRTQVEKPSSSPSP
SPSTAAGAGAQ