Protein Info for mRNA_5214 in Rhodosporidium toruloides IFO0880

Name: 13582
Annotation: K03845 ALG3 alpha-1,3-mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 506 transmembrane" amino acids 78 to 98 (21 residues), see Phobius details amino acids 132 to 149 (18 residues), see Phobius details amino acids 160 to 178 (19 residues), see Phobius details amino acids 201 to 225 (25 residues), see Phobius details amino acids 243 to 270 (28 residues), see Phobius details amino acids 279 to 300 (22 residues), see Phobius details amino acids 339 to 359 (21 residues), see Phobius details amino acids 383 to 406 (24 residues), see Phobius details amino acids 413 to 433 (21 residues), see Phobius details amino acids 455 to 475 (21 residues), see Phobius details PF05208: ALG3" amino acids 82 to 458 (377 residues), 393.2 bits, see alignment E=7.3e-122

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (506 amino acids)

>mRNA_5214 K03845 ALG3 alpha-1,3-mannosyltransferase (Rhodosporidium toruloides IFO0880)
MYGIPPPPRLPKDAPQSKPSLSSSSQPTTSSSSRFTEIDPSSSRSAAKRTMDGEQSLVSY
LLEHPAALFTDHERCFDLVATAVLLWESVLSVGVVNYIKYTEIDFSTYMQQAQAFLDGER
DYSMMKGDSGPAYYPALHIYLYSAISRLTAGGKHLERAQWLFAGVYVLTMAIVIFGIYRR
NPKIPPYALPLLTISKRLHSIYMLRMFNDALVMLFVYSAIALYMVPAKTASPVQRRKLER
RWLFGTVLMSCALSIKMSTLLFLPALFYLLFTQSSPLTLLQHVLVLCLTQTLFALPFALA
SRAHLTTYLSQAFDFSRTFEWEYTMNWRWLGEEAFENPAWGKMLLVAHAAGLALWAWKWA
EEDGGVEKVLRRALSKPTKKPALTALTSARIATLFFVSNLTGIVCARSLHPQFYAWFAHQ
GVWMVFGTGWAIEPMHGLVVLSLIEYGFSVWPSTVNSSLGLVLSLLVTLVSVYYVEADRS
AVRGGKEGVVVPAEWADAEGKGGKKE